RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 LMO2P25791 158 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 GARSP41250 739 aaKnown RBP12.52□□□□□ -0.41
TMEM116-202ENST00000437003 GRIA4P48058 902 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 RPL14P50914 215 aaKnown RBP12.52□□□□□ -0.41
TMEM116-202ENST00000437003 NAGLUP54802 743 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 PSME3P61289 254 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF618Q5T7W0 954 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 STEAP4Q687X5 459 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 SETD3Q86TU7 594 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-202ENST00000437003 ACVR1CQ8NER5 493 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 LPGAT1Q92604 370 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 SLCO4A1Q96BD0 722 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 CXorf21Q9HAI6 301 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 NMRAL1Q9HBL8 299 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 ZBTB26Q9HCK0 441 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 VPS45Q9NRW7 570 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 GMPR2Q9P2T1 348 aaKnown RBP12.52□□□□□ -0.41
TMEM116-202ENST00000437003 VPS28Q9UK41 221 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 CNOT11Q9UKZ1 510 aaKnown RBP12.52□□□□□ -0.41
TMEM116-202ENST00000437003 SLC8A2Q9UPR5 921 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 CDYLQ9Y232 598 aa12.52□□□□□ -0.41
TMEM116-202ENST00000437003 COPG1Q9Y678 874 aaKnown RBP12.52□□□□□ -0.41
TMEM116-202ENST00000437003 COL1A2P08123 1366 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF839A8K0R7 811 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 H3BMQ9 156 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 GOLGA8TH3BQL2 631 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 GRID2O43424 1007 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 AKAP10O43572 662 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 TPST1O60507 370 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 PSMB4P28070 264 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 GABRB3P28472 473 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 ARL4AP40617 200 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 TMED10P49755 219 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 TUBA4AP68366 448 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 PITX1P78337 314 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 TRIM25Q14258 630 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 ZBED5Q49AG3 693 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 AARS2Q5JTZ9 985 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 MARCH8Q5T0T0 291 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 FSTL4Q6MZW2 842 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 HMBOX1Q6NT76 420 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 LYSMD3Q7Z3D4 306 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 TP53INP2Q8IXH6 220 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 TBC1D15Q8TC07 691 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 SREK1Q8WXA9 508 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 COG8Q96MW5 612 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 QKIQ96PU8 341 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 HIPK3Q9H422 1215 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 DUS2Q9NX74 493 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 CEP350Q5VT06 3117 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 A0A087WXM4 84 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 KCNK1O00180 336 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 RNF103O00237 685 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 BMP10O95393 424 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF24P17028 368 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 PGAM1P18669 254 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 AKAP5P24588 427 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 EIF2B2P49770 351 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 NME3Q13232 169 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 PMS2P3Q13401 168 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 SEMA5AQ13591 1074 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF829Q3KNS6 432 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 PITRM1Q5JRX3 1037 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 CHSY3Q70JA7 882 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 CHST15Q7LFX5 561 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 SHCBP1Q8NEM2 672 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 GPRC5AQ8NFJ5 357 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 ASB9Q96DX5 294 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 CERS2Q96G23 380 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 NEURL2Q9BR09 285 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 EIF2AQ9BY44 585 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 NACA2Q9H009 215 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 RPF2Q9H7B2 306 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 VTA1Q9NP79 307 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 KLK14Q9P0G3 267 aa12.51□□□□□ -0.41
TMEM116-202ENST00000437003 CNOT6Q9ULM6 557 aaKnown RBP12.51□□□□□ -0.41
TMEM116-202ENST00000437003 CCDC78A2IDD5 438 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 FAM149AA5PLN7 773 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 C2P06681 752 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 IDO1P14902 403 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 KPNA1P52294 538 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-202ENST00000437003 GNA12Q03113 381 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 CBLBQ13191 982 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF792Q3KQV3 632 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 DCAF4L1Q3SXM0 396 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 CATSPER4Q7RTX7 472 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 ZDHHC17Q8IUH5 632 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 HM13Q8TCT9 377 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF669Q96BR6 464 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-202ENST00000437003 FCRL3Q96P31 734 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-202ENST00000437003 ANKRD60Q9BZ19 345 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 TASP1Q9H6P5 420 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 PLEKHA5Q9HAU0 1116 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-202ENST00000437003 RAP2CQ9Y3L5 183 aa12.5□□□□□ -0.41
TMEM116-202ENST00000437003 ZNF638Q14966 1978 aaKnown RBP12.5□□□□□ -0.41
TMEM116-202ENST00000437003 A0A0A0MRY4 1105 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms