RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 TMEM116Q8NCL8 245 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 GTF3C6Q969F1 213 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 RNF183Q96D59 192 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 ZC3HAV1LQ96H79 300 aaKnown RBP4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 ZNF419Q96HQ0 510 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 CMTM3Q96MX0 182 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 SIN3AQ96ST3 1273 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 STRA6Q9BX79 667 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 SEMA4CQ9C0C4 833 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 RIOX1Q9H6W3 641 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 ASAH2Q9NR71 780 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 SPATS2LQ9NUQ6 558 aaKnown RBP4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 NLKQ9UBE8 527 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 NRBP1Q9UHY1 535 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 RAP2CQ9Y3L5 183 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 SNX8Q9Y5X2 465 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 SESN1Q9Y6P5 492 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 WDR33Q9C0J8 1336 aaKnown RBP4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 hCG_1807616A0A1W2PRN6 198 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 TARSL2A2RTX5 802 aaKnown RBP4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 C2CD4BA6NLJ0 364 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 C17orf100A8MU93 164 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 EBAG9O00559 213 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 CYR61O00622 381 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 TUBB4AP04350 444 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 PRKCGP05129 697 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 HEXAP06865 529 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 MYZAPP0CAP1 466 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 KRT4P19013 534 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 ACVRL1P37023 503 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 RGS2P41220 211 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 TFAP4Q01664 338 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 NIPAL4Q0D2K0 466 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 FOXF2Q12947 444 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 CSTF3Q12996 717 aaKnown RBP4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 OLIG2Q13516 323 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 MYBPC2Q14324 1141 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 FRG1Q14331 258 aaKnown RBP4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 MED22Q15528 200 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 ZSCAN23Q3MJ62 389 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 FBXO43Q4G163 708 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 PLEKHS1Q5SXH7 462 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 KIAA1614Q5VZ46 1190 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 TSSK4Q6SA08 328 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 Q6ZPA2 131 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 SERPINA11Q86U17 422 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 LDLRAD3Q86YD5 345 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 LURAP1LQ8IV03 231 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 ARHGAP12Q8IWW6 846 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 DDIASQ8IXT1 998 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 ADGRF2Q8IZF7 708 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 C17orf53Q8N3J3 647 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 ZCCHC9Q8N567 271 aaKnown RBP4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 SLC25A41Q8N5S1 370 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 BOLLQ8N9W6 283 aaKnown RBP4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 PGAM5Q96HS1 289 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 TMEM68Q96MH6 324 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 SCAND2PQ9GZW5 306 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 TASP1Q9H6P5 420 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 ZNF304Q9HCX3 659 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 TMEM45AQ9NWC5 275 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 HSPB7Q9UBY9 170 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 SLCO3A1Q9UIG8 710 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 UTS2RQ9UKP6 389 aa4.76□□□□□ -1.65
HMGB1P45-201ENST00000435986 KIR2DS5A0A0G2JLQ3 304 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 KIR2DS3K7RE56 304 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 SCAMP1O15126 338 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 SLC25A12O75746 678 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 NEURL1O76050 574 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 TFP02787 698 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 ENO3P13929 434 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 EPHB2P29323 1055 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 CDAP32320 146 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 KRT20P35900 424 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 CENPAP49450 140 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 NLRP5P59047 1200 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 ID2Q02363 134 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 RNPS1Q15287 305 aaKnown RBP4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 DUSP28Q4G0W2 176 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 DCAF6Q58WW2 860 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 MEX3CQ5U5Q3 659 aaKnown RBP4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 TXNDC8Q6A555 127 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 TTI2Q6NXR4 508 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 ZNF793Q6ZN11 406 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 KIAA2013Q8IYS2 634 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 GALNT16Q8N428 558 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 SLC16A11Q8NCK7 471 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 RASSF8Q8NHQ8 419 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 ATOH1Q92858 354 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 HARBI1Q96MB7 349 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 PIMREGQ9BSJ6 248 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 SCNM1Q9BWG6 230 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 HEMGNQ9BXL5 484 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 TEX12Q9BXU0 123 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 CDT1Q9H211 546 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 CXorf56Q9H5V9 222 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 BPIFA1Q9NP55 256 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 PNRC2Q9NPJ4 139 aaKnown RBP4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 SEL1LQ9UBV2 794 aa4.75□□□□□ -1.65
HMGB1P45-201ENST00000435986 INTS6Q9UL03 887 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms