RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 GRM3Q14832 879 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 MYLK3Q32MK0 819 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 IZUMO3Q5VZ72 239 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 DUPD1Q68J44 220 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 NCEH1Q6PIU2 408 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 PCGF5Q86SE9 256 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 TXNDC5Q8NBS9 432 aaKnown RBP23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 UBXN4Q92575 508 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 OXNAD1Q96HP4 312 aaPredicted RBP23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 GABRG3Q99928 467 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 GORASP1Q9BQQ3 440 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 MTG2Q9H4K7 406 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 ZDHHC6Q9H6R6 413 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 LMAN1LQ9HAT1 526 aa23.49■■□□□ 1.35
SMARCAL1-208ENST00000434435 FAM170BA6NMN3 283 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 STK25O00506 426 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 POP4O95707 220 aaKnown RBP23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 MT-CYBP00156 380 aaPredicted RBP23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 HOXB2P14652 356 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 CA4P22748 312 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 TERF1P54274 439 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 GUCY2DQ02846 1103 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 MPP3Q13368 585 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 ELAVL3Q14576 367 aaKnown RBP23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 STARD3Q14849 445 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 EOGTQ5NDL2 527 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 C9orf64Q5T6V5 341 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 PRPF39Q86UA1 669 aaKnown RBP23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 KLHDC8BQ8IXV7 354 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 CHST14Q8NCH0 376 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 BBOF1Q8ND07 529 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 OR8D1Q8WZ84 308 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 EDAQ92838 391 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 TADA1Q96BN2 335 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 TUBGCP5Q96RT8 1024 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 HEPHQ9BQS7 1158 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 MLPHQ9BV36 600 aaPredicted RBP23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 ATP13A3Q9H7F0 1226 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 UBP1Q9NZI7 540 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 DMGDHQ9UI17 866 aaKnown RBP23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 TPX2Q9ULW0 747 aaKnown RBP23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 SNX24Q9Y343 169 aa23.48■■□□□ 1.35
SMARCAL1-208ENST00000434435 ERI2A8K979 691 aaKnown RBP23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 ALOX15BO15296 676 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 SYNCRIPO60506 623 aaKnown RBP23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 PMPCBO75439 489 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 APRTP07741 180 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 IVDP26440 423 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 PPIL6Q8IXY8 311 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 PJA1Q8NG27 643 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 FSD1LQ9BXM9 530 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 CPEB1Q9BZB8 566 aaKnown RBP23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 OSBPL6Q9BZF3 934 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 EPB41L5Q9HCM4 733 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 PRSS16Q9NQE7 514 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 EIF2B3Q9NR50 452 aaKnown RBP23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 WHRNQ9P202 907 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 IL36AQ9UHA7 158 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 MMP17Q9ULZ9 603 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 MTF2Q9Y483 593 aaPredicted RBP23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 MYLKQ15746 1914 aa23.47■■□□□ 1.35
SMARCAL1-208ENST00000434435 ADAM23O75077 832 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 SOCS5O75159 536 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 SEC31AO94979 1220 aaKnown RBP23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 AP2A1O95782 977 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 TPSB2P20231 275 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 SERPINA4P29622 427 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 DRG2P55039 364 aaKnown RBP23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 BCL2L1Q07817 233 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 CALCOCO2Q13137 446 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 CAMK2GQ13555 558 aaPredicted RBP23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 KCNJ11Q14654 390 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 TPSAB1Q15661 275 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 KDELC1Q6UW63 502 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 Q6ZS52 159 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 DSG4Q86SJ6 1040 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 STK40Q8N2I9 435 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 PDCD7Q8N8D1 485 aaKnown RBP23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 IPMKQ8NFU5 416 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 CPT1BQ92523 772 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 MFSD1Q9H3U5 465 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 LRRC40Q9H9A6 602 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 FBRSQ9HAH7 460 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 FAM114A2Q9NRY5 505 aa23.46■■□□□ 1.35
SMARCAL1-208ENST00000434435 BHMG1C9JSJ3 638 aaPredicted RBP23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 PRNPP04156 253 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 GKP32189 559 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 MAGEA6P43360 314 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 TNNT3P45378 269 aaPredicted RBP23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 WNT3AP56704 352 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 CDK16Q00536 496 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 PCSK7Q16549 785 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 SYCP2LQ5T4T6 812 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 RNASEH2BQ5TBB1 312 aaKnown RBP23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 KCTD11Q693B1 232 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 HOOK3Q86VS8 718 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 GRIN3AQ8TCU5 1115 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 SEC14L1Q92503 715 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 LRIG1Q96JA1 1093 aa23.45■■□□□ 1.34
SMARCAL1-208ENST00000434435 NSMCE3Q96MG7 304 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms