RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-205	ENST00000433369	FBXL19	Q6PCT2	694 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	VPS36	Q86VN1	386 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	MFSD2A	Q8NA29	543 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	RHBDD1	Q8TEB9	315 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	HSPH1	Q92598	858 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	IQCD	Q96DY2	449 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	PPP1R16A	Q96I34	528 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	NSMCE3	Q96MG7	304 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	ELF4	Q99607	663 aa	Predicted RBP	12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	DNAJC7	Q99615	494 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	CHP1	Q99653	195 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	SCNM1	Q9BWG6	230 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	UBA2	Q9UBT2	640 aa	Predicted RBP	12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	DMTF1	Q9Y222	760 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	PCDHGB2	Q9Y5G2	931 aa		12.83	□□□□□ -0.36
PTPN12-205	ENST00000433369	KNTC1	P50748	2209 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	PRAMEF26	H0Y7S4	382 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	FLRT2	O43155	660 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	DAPK3	O43293	454 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	PCDHGA12	O60330	932 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	BUB1B	O60566	1050 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	CD48	P09326	243 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	ATXN1L	P0C7T5	689 aa	Known RBP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	NDST2	P52849	883 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	ADK	P55263	362 aa	Known RBP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	PIGH	Q14442	188 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	ACAP1	Q15027	740 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	ATP13A4	Q4VNC1	1196 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	NEK5	Q6P3R8	708 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	GDPD4	Q6W3E5	623 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	GCNT7	Q6ZNI0	430 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	POLN	Q7Z5Q5	900 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	PSTK	Q8IV42	348 aa	Known RBP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	CHCHD4	Q8N4Q1	142 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	NIPA2	Q8N8Q9	360 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	OR8K1	Q8NGG5	319 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	SAP25	Q8TEE9	199 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	BMF	Q96LC9	184 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	GDAP1L1	Q96MZ0	367 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	GDF3	Q9NR23	364 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	KLK13	Q9UKR3	277 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	TPX2	Q9ULW0	747 aa	Known RBP	12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	PCDHB9	Q9Y5E1	797 aa		12.82	□□□□□ -0.36
PTPN12-205	ENST00000433369	COL5A1	P20908	1838 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	TTC24	A2A3L6	582 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	POM121B	A6NF01	834 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	IGLON5	A6NGN9	336 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	ARHGAP42	A6NI28	874 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	EIF3CL	B5ME19	914 aa	Known RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	DFFA	O00273	331 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	MUSK	O15146	869 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	CBFA2T2	O43439	604 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	AP1G1	O43747	822 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	IGSF6	O95976	241 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	PAK4	O96013	591 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	TIMP2	P16035	220 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	HCAR3	P49019	387 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	MMRN1	Q13201	1228 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	STAT4	Q14765	748 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	SLC18A3	Q16572	532 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	KANSL1	Q7Z3B3	1105 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	GLRX5	Q86SX6	157 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	ZSWIM9	Q86XI8	627 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	SLC22A18AS	Q8N1D0	253 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	TSEN2	Q8NCE0	465 aa	Known RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	OR13H1	Q8NG92	308 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	CASKIN2	Q8WXE0	1202 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	TSC1	Q92574	1164 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	LRIG1	Q96JA1	1093 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	CSPG4P5	Q96PW8	444 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	KLF6	Q99612	283 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	EIF3C	Q99613	913 aa	Known RBP	12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	SLC17A9	Q9BYT1	436 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	PCDH18	Q9HCL0	1135 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	ABHD10	Q9NUJ1	306 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	IP6K2	Q9UHH9	426 aa		12.81	□□□□□ -0.36
PTPN12-205	ENST00000433369	GOLGA8CP	A6NN73	597 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	C1QTNF9B	B2RNN3	333 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369		H3BRJ5	948 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	AREL1	O15033	823 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	SDC3	O75056	442 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	MFAP3L	O75121	409 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	PRKCG	P05129	697 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	TPM3	P06753	285 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	C1QTNF9	P0C862	333 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	THEGL	P0DJG4	465 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	HNRNPA2B1	P22626	353 aa	Known RBP	12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	IL4R	P24394	825 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	EPHA8	P29322	1005 aa	Predicted RBP	12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	AKT2	P31751	481 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	NUDT1	P36639	197 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	ARSE	P51690	589 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	TAS2R40	P59535	323 aa		12.8	□□□□□ -0.36
PTPN12-205	ENST00000433369	RPS21	P63220	83 aa	Known RBP	12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms