RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TAF7Q15545 349 aaPredicted RBP4.35□□□□□ -1.71
HMGB3-203ENST00000430118 DUSP28Q4G0W2 176 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 SPECC1Q5M775 1068 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 PLEKHS1Q5SXH7 462 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 KIAA0895LQ68EN5 471 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 GJB7Q6PEY0 223 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 Q6ZWC4 215 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 ZNF551Q7Z340 670 aaPredicted RBP4.35□□□□□ -1.71
HMGB3-203ENST00000430118 ARHGEF19Q8IW93 802 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 TTC9BQ8N6N2 239 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 LINC01465Q8N7H1 131 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 C12orf76Q8N812 135 aaPredicted RBP4.35□□□□□ -1.71
HMGB3-203ENST00000430118 SYT8Q8NBV8 401 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 ABHD11Q8NFV4 315 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 TBC1D16Q8TBP0 767 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 RAB40AQ8WXH6 277 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 TBC1D5Q92609 795 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 FRAT1Q92837 279 aaPredicted RBP4.35□□□□□ -1.71
HMGB3-203ENST00000430118 NPLQ9BXD5 320 aaPredicted RBP4.35□□□□□ -1.71
HMGB3-203ENST00000430118 CLPBQ9H078 707 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 SLC25A18Q9H1K4 315 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 R3HDMLQ9H3Y0 253 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 MROH8Q9H579 483 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 SAP30LQ9HAJ7 183 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 ABHD10Q9NUJ1 306 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 PARPBPQ9NWS1 579 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 MTMR10Q9NXD2 777 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 ZDHHC7Q9NXF8 308 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 KCTD5Q9NXV2 234 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 MTMR4Q9NYA4 1195 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 SEMA5BQ9P283 1151 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 CDH22Q9UJ99 828 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 ISY1Q9ULR0 285 aaKnown RBP4.35□□□□□ -1.71
HMGB3-203ENST00000430118 FZD4Q9ULV1 537 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 NOL7Q9UMY1 257 aaKnown RBP4.35□□□□□ -1.71
HMGB3-203ENST00000430118 TCAF1Q9Y4C2 921 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 PIAS3Q9Y6X2 628 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 ASTN2O75129 1339 aaPredicted RBP4.35□□□□□ -1.71
HMGB3-203ENST00000430118 LAMB2P55268 1798 aa4.35□□□□□ -1.71
HMGB3-203ENST00000430118 AGAP14A8MT82 685 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 CES2O00748 559 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 TLR2O60603 784 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 SPDEFO95238 335 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 NDUFA10O95299 355 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 C1RP00736 705 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 MBPP02686 304 aaPredicted RBP4.34□□□□□ -1.71
HMGB3-203ENST00000430118 RPN1P04843 607 aaKnown RBP4.34□□□□□ -1.71
HMGB3-203ENST00000430118 PDHA1P08559 390 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 C1SP09871 688 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 CYP4B1P13584 511 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 AKR1B1P15121 316 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 ARSAP15289 507 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 IL11P20809 199 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 CTGFP29279 349 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 PRKAR2BP31323 418 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 HNF1BP35680 557 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 FOLR3P41439 243 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 MTNR1AP48039 350 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 GPC5P78333 572 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 ARHGAP8P85298 464 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 E2F1Q01094 437 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 MC1RQ01726 317 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 CFHR3Q02985 330 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 DEUP1Q05D60 604 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 NAA25Q14CX7 972 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 PSMD6Q15008 389 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 PRKD1Q15139 912 aaPredicted RBP4.34□□□□□ -1.71
HMGB3-203ENST00000430118 GXYLT1Q4G148 440 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 ABHD17BQ5VST6 288 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 AADACL2Q6P093 401 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 NCEH1Q6PIU2 408 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 SARM1Q6SZW1 724 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 SLC22A25Q6T423 547 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 SCN4BQ8IWT1 228 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 ZNF276Q8N554 614 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 C11orf65Q8NCR3 313 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 U2AF1L4Q8WU68 220 aaKnown RBP4.34□□□□□ -1.71
HMGB3-203ENST00000430118 SCFD2Q8WU76 684 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 RUFY2Q8WXA3 655 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 POMGNT1Q8WZA1 660 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 RFKQ969G6 155 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 FAM149B1Q96BN6 582 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 OPTNQ96CV9 577 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 EDC3Q96F86 508 aaKnown RBP4.34□□□□□ -1.71
HMGB3-203ENST00000430118 ELOVL1Q9BW60 279 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 FSD1LQ9BXM9 530 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 AP1M1Q9BXS5 423 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 USP44Q9H0E7 712 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 TSPYL1Q9H0U9 437 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 DEFB129Q9H1M3 183 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 ZNF768Q9H5H4 540 aaKnown RBP4.34□□□□□ -1.71
HMGB3-203ENST00000430118 TTC12Q9H892 705 aaPredicted RBP4.34□□□□□ -1.71
HMGB3-203ENST00000430118 CD248Q9HCU0 757 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 EHD2Q9NZN4 543 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 MORF4L1Q9UBU8 362 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 KLQ9UEF7 1012 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 POLLQ9UGP5 575 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 FZD1Q9UP38 647 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 MAP3K2Q9Y2U5 619 aa4.34□□□□□ -1.71
HMGB3-203ENST00000430118 MED23Q9ULK4 1368 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms