RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CDH17Q12864 832 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 ZBTB17Q13105 803 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 LBRQ14739 615 aaKnown RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 FUT11Q495W5 492 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 LIN52Q52LA3 116 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 GNASQ5JWF2 1037 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 FBXO46Q6PJ61 603 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 ARHGAP36Q6ZRI8 547 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 ARPINQ7Z6K5 226 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 UNC93AQ86WB7 457 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 BLOC1S5Q8TDH9 187 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 KHSRPQ92945 711 aaKnown RBP eCLIP8.16□□□□□ -1.1
HPS4-205ENST00000429411 SLC39A3Q9BRY0 314 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 GPAMQ9HCL2 828 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 PNPLA8Q9NP80 782 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 MTMR10Q9NXD2 777 aa8.16□□□□□ -1.1
HPS4-205ENST00000429411 ABI2Q9NYB9 513 aaPredicted RBP8.16□□□□□ -1.1
HPS4-205ENST00000429411 HACD1B0YJ81 288 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.15□□□□□ -1.1
HPS4-205ENST00000429411 LRIG2O94898 1065 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 SMIM10L2AP0DMW4 78 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 SMIM10L2BP0DMW5 78 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 GFAPP14136 432 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 UQCRBP14927 111 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 ME2P23368 584 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 RGS2P41220 211 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 LIMK2P53671 638 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 LAMB3Q13751 1172 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 TBC1D25Q3MII6 688 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 PAOXQ6QHF9 649 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 RBM44Q6ZP01 1051 aaKnown RBP8.15□□□□□ -1.1
HPS4-205ENST00000429411 STRADAQ7RTN6 431 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 METTL23Q86XA0 190 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 PQLC1Q8N2U9 271 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.15□□□□□ -1.1
HPS4-205ENST00000429411 GPR152Q8TDT2 470 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 ACMSDQ8TDX5 336 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 SNRNP27Q8WVK2 155 aaKnown RBP8.15□□□□□ -1.1
HPS4-205ENST00000429411 DCUN1D1Q96GG9 259 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 PAWRQ96IZ0 340 aaKnown RBP8.15□□□□□ -1.1
HPS4-205ENST00000429411 SNX27Q96L92 541 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 HSFY1Q96LI6 401 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 KLHL5Q96PQ7 755 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 CCT7Q99832 543 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 SPON2Q9BUD6 331 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 DUSP16Q9BY84 665 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 MOCS1Q9NZB8 636 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 SLC2A6Q9UGQ3 507 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 ZDHHC2Q9UIJ5 367 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 FAF1Q9UNN5 650 aaPredicted RBP8.15□□□□□ -1.1
HPS4-205ENST00000429411 ATP11BQ9Y2G3 1177 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 AP4B1Q9Y6B7 739 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 DNAJA2O60884 412 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 CCDC166P0CW27 439 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 PAMP19021 973 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 EEF1B2P24534 225 aaKnown RBP8.15□□□□□ -1.1
HPS4-205ENST00000429411 CCND3P30281 292 aaPredicted RBP8.15□□□□□ -1.1
HPS4-205ENST00000429411 BRCC3P46736 316 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 TSPY1Q01534 308 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 CCNIQ14094 377 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 CNPY1Q3B7I2 92 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 ARHGAP17Q68EM7 881 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 CLEC6AQ6EIG7 209 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 KIAA1958Q8N8K9 716 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 TRIB2Q92519 343 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 JADE3Q92613 823 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 SP110Q9HB58 689 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 PLAC1Q9HBJ0 212 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 IPPQ9Y573 584 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 NME7Q9Y5B8 376 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 SCN4AP35499 1836 aa8.15□□□□□ -1.1
HPS4-205ENST00000429411 DOCK3Q8IZD9 2030 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 RGSL1A5PLK6 1076 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 ERI2A8K979 691 aaKnown RBP8.15□□□□□ -1.11
HPS4-205ENST00000429411 NR5A2O00482 541 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 SCAMP3O14828 347 aaKnown RBP8.15□□□□□ -1.11
HPS4-205ENST00000429411 PQBP1O60828 265 aaKnown RBP8.15□□□□□ -1.11
HPS4-205ENST00000429411 SNNO75324 88 aaPredicted RBP8.15□□□□□ -1.11
HPS4-205ENST00000429411 SUPT3HO75486 399 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 ENDOD1O94919 500 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 OR4Q2P0C623 313 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 CCL5P13501 91 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 AOC1P19801 751 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 YWHAHQ04917 246 aaPredicted RBP8.15□□□□□ -1.11
HPS4-205ENST00000429411 PRKAA1Q13131 559 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 TAZQ16635 292 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 CWF19L1Q69YN2 538 aaKnown RBP8.15□□□□□ -1.11
HPS4-205ENST00000429411 SCIMPQ6UWF3 145 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 NPWQ8N729 165 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 OR52K2Q8NGK3 314 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 SCAMP5Q8TAC9 235 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 GABPB2Q8TAK5 448 aaPredicted RBP8.15□□□□□ -1.11
HPS4-205ENST00000429411 NPLOC4Q8TAT6 608 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 TMEM40Q8WWA1 233 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 ARNTL2Q8WYA1 636 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 ATP6V1E2Q96A05 226 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 PCED1BQ96HM7 432 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 COLEC11Q9BWP8 271 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 UPF3AQ9H1J1 476 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms