RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 APOA4P06727 396 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 RBL1P28749 1068 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 GP5P40197 560 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 PPP5CP53041 499 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 SUZ12Q15022 739 aaKnown RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 HIST2H2ACQ16777 129 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 GRTP1Q5TC63 336 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 CYP4A22Q5TCH4 519 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 ERO1BQ86YB8 467 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 PELI3Q8N2H9 469 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 ANKRD52Q8NB46 1076 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 PHF10Q8WUB8 498 aaKnown RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 TRIM63Q969Q1 353 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 FAM84AQ96KN4 292 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 CCDC17Q96LX7 622 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 EHMT1Q9H9B1 1298 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 TBC1D13Q9NVG8 400 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 PI4KBQ9UBF8 816 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 RABL2AQ9UBK7 228 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-206ENST00000428313 ZBTB21Q9ULJ3 1066 aa16.25■□□□□ 0.19
C9orf3-206ENST00000428313 C16orf96A6NNT2 1141 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 PIK3R2O00459 728 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 EI24O14681 340 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 NRP1O14786 923 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 MLNP12872 115 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 BMP1P13497 986 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 TFE3P19532 575 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-206ENST00000428313 TGM2P21980 687 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 PSMA4P25789 261 aaKnown RBP16.24■□□□□ 0.19
C9orf3-206ENST00000428313 MIPP30301 263 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 TUFMP49411 452 aaKnown RBP16.24■□□□□ 0.19
C9orf3-206ENST00000428313 SLC26A2P50443 739 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 SNAP25P60880 206 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 VAC14Q08AM6 782 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 DDIASQ8IXT1 998 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 SLC38A6Q8IZM9 456 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 PLD6Q8N2A8 252 aaKnown RBP16.24■□□□□ 0.19
C9orf3-206ENST00000428313 JOSD2Q8TAC2 188 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 MUL1Q969V5 352 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 RMDN1Q96DB5 314 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 NGLY1Q96IV0 654 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 FAM213AQ9BRX8 229 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 DNAI2Q9GZS0 605 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 NPAP1Q9NZP6 1156 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 TXNDC16Q9P2K2 825 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 WARS2Q9UGM6 360 aaKnown RBP16.24■□□□□ 0.19
C9orf3-206ENST00000428313 NARFQ9UHQ1 456 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 GGA1Q9UJY5 639 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 UGT2A1Q9Y4X1 527 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 PSAT1Q9Y617 370 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 TRPC5OSA6NMA1 111 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 MAN1A2O60476 641 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 ARP10275 920 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 TNNI1P19237 187 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 GRK3P35626 688 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 GABARAPL2P60520 117 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 SQLEQ14534 574 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 RSBN1Q5VWQ0 802 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-206ENST00000428313 LIPMQ5VYY2 423 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 SPARTQ8N0X7 666 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 WDTC1Q8N5D0 677 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 BEST2Q8NFU1 509 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 TTC9Q92623 222 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 CPXM1Q96SM3 734 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 CPNE1Q99829 537 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 CCDC177Q9NQR7 707 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-206ENST00000428313 POLE4Q9NR33 117 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 PCSK1NQ9UHG2 260 aa16.24■□□□□ 0.19
C9orf3-206ENST00000428313 WDR27A2RRH5 827 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 EXTL3O43909 919 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 HTR1BP28222 390 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 GRIK1P39086 918 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 NPTX2P47972 431 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 DMP1Q13316 513 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-206ENST00000428313 LAMC2Q13753 1193 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 VPS72Q15906 364 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 NFE2Q16621 373 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-206ENST00000428313 ARL13AQ5H913 290 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-206ENST00000428313 CEP78Q5JTW2 689 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 UBE2UQ5VVX9 321 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 CYP4V2Q6ZWL3 525 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-206ENST00000428313 CMTR2Q8IYT2 770 aaKnown RBP16.23■□□□□ 0.19
C9orf3-206ENST00000428313 LSMEM1Q8N8F7 131 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 FAM110BQ8TC76 370 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 MYRFLQ96LU7 910 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 RETREG1Q9H6L5 497 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 C12orf10Q9HB07 376 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 NMRAL1Q9HBL8 299 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.23■□□□□ 0.19
C9orf3-206ENST00000428313 FKBP14Q9NWM8 211 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 ZDHHC2Q9UIJ5 367 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 USP18Q9UMW8 372 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 AURKCQ9UQB9 309 aa16.23■□□□□ 0.19
C9orf3-206ENST00000428313 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 UPK1BO75841 260 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 GABARAPO95166 117 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 PTTG1O95997 202 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 LTFP02788 710 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 PGAM1P18669 254 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms