RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CASKIN2Q8WXE0 1202 aa19.44■□□□□ 0.7
COL9A2-204ENST00000427563 NSMCE3Q96MG7 304 aa19.44■□□□□ 0.7
COL9A2-204ENST00000427563 KLHL32Q96NJ5 620 aa19.44■□□□□ 0.7
COL9A2-204ENST00000427563 TMEM121BQ9BXQ6 578 aaPredicted RBP19.44■□□□□ 0.7
COL9A2-204ENST00000427563 PLXNB3Q9ULL4 1909 aa19.44■□□□□ 0.7
COL9A2-204ENST00000427563 CEP295Q9C0D2 2601 aa19.44■□□□□ 0.7
COL9A2-204ENST00000427563 COL5A1P20908 1838 aaPredicted RBP19.44■□□□□ 0.7
COL9A2-204ENST00000427563 PRAMEF26H0Y7S4 382 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 FLRT2O43155 660 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 PCDH8O95206 1070 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 FTH1P19P0C7X4 201 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 ITIH2P19823 946 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 AMPD1P23109 780 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 HCAR3P49019 387 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 CLDN2P57739 230 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 RHOAP61586 193 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 HNRNPDQ14103 355 aaKnown RBP19.43■□□□□ 0.7
COL9A2-204ENST00000427563 PIGHQ14442 188 aaPredicted RBP19.43■□□□□ 0.7
COL9A2-204ENST00000427563 LRRC73Q5JTD7 316 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 KDM7AQ6ZMT4 941 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 POLNQ7Z5Q5 900 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 VPS36Q86VN1 386 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 PNPLA1Q8N8W4 532 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 SAP25Q8TEE9 199 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 LRIG1Q96JA1 1093 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 GDAP1L1Q96MZ0 367 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 CHP1Q99653 195 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 SCNM1Q9BWG6 230 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 ZWILCHQ9H900 591 aa19.43■□□□□ 0.7
COL9A2-204ENST00000427563 UBA2Q9UBT2 640 aaPredicted RBP19.43■□□□□ 0.7
COL9A2-204ENST00000427563 TDRD6O60522 2096 aaKnown RBP19.43■□□□□ 0.7
COL9A2-204ENST00000427563 AREL1O15033 823 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 CBFA2T2O43439 604 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 PIGNO95427 931 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 BNIP3Q12983 259 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
COL9A2-204ENST00000427563 FBXL19Q6PCT2 694 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 GDPD4Q6W3E5 623 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 RAB44Q7Z6P3 723 aaPredicted RBP19.42■□□□□ 0.7
COL9A2-204ENST00000427563 IQCHQ86VS3 1027 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 GAS2L3Q86XJ1 694 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 OR8K1Q8NGG5 319 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 RHBDD1Q8TEB9 315 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 TSC1Q92574 1164 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 HSPH1Q92598 858 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 BMFQ96LC9 184 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 CSPG4P5Q96PW8 444 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 KLF6Q99612 283 aaPredicted RBP19.42■□□□□ 0.7
COL9A2-204ENST00000427563 PCDH18Q9HCL0 1135 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 GDF3Q9NR23 364 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.42■□□□□ 0.7
COL9A2-204ENST00000427563 KLK13Q9UKR3 277 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 SHROOM3Q8TF72 1996 aa19.42■□□□□ 0.7
COL9A2-204ENST00000427563 ARHGAP42A6NI28 874 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 MUSKO15146 869 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 BUB1BO60566 1050 aaPredicted RBP19.41■□□□□ 0.7
COL9A2-204ENST00000427563 DKK1O94907 266 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 IGSF6O95976 241 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 ATXN1LP0C7T5 689 aaKnown RBP19.41■□□□□ 0.7
COL9A2-204ENST00000427563 TIMP2P16035 220 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 HNRNPA2B1P22626 353 aaKnown RBP19.41■□□□□ 0.7
COL9A2-204ENST00000427563 IL4RP24394 825 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 EPHA8P29322 1005 aaPredicted RBP19.41■□□□□ 0.7
COL9A2-204ENST00000427563 RXRGP48443 463 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 ARSEP51690 589 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 ADKP55263 362 aaKnown RBP19.41■□□□□ 0.7
COL9A2-204ENST00000427563 CCDC15Q0P6D6 951 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 STAT4Q14765 748 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 SLC18A3Q16572 532 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 BOLA3Q53S33 107 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 ABI3BPQ7Z7G0 1075 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 ZSWIM9Q86XI8 627 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 SLC22A18ASQ8N1D0 253 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 CHCHD4Q8N4Q1 142 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 OR13H1Q8NG92 308 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 ZNF564Q8TBZ8 553 aaPredicted RBP19.41■□□□□ 0.7
COL9A2-204ENST00000427563 TEKT4Q8WW24 435 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 NCAPGQ9BPX3 1015 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 OSBPL1AQ9BXW6 950 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 ERVMER34-1Q9H9K5 563 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 IP6K2Q9UHH9 426 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 PCDHB9Q9Y5E1 797 aa19.41■□□□□ 0.7
COL9A2-204ENST00000427563 POM121BA6NF01 834 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 IGLON5A6NGN9 336 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 DFFAO00273 331 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 DAPK3O43293 454 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 DFNA5O60443 496 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 MFAP3LO75121 409 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 PEX11BO96011 259 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 PAK4O96013 591 aaPredicted RBP19.4■□□□□ 0.7
COL9A2-204ENST00000427563 TPM3P06753 285 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 CD48P09326 243 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 RPS21P63220 83 aaKnown RBP19.4■□□□□ 0.7
COL9A2-204ENST00000427563 MMRN1Q13201 1228 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 TBX2Q13207 712 aaPredicted RBP19.4■□□□□ 0.7
COL9A2-204ENST00000427563 TRIM14Q14142 442 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 ATP13A4Q4VNC1 1196 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 SLC45A4Q5BKX6 768 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 KIAA1161Q6NSJ0 714 aa19.4■□□□□ 0.7
COL9A2-204ENST00000427563 TSEN2Q8NCE0 465 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms