RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HADHQ16836 314 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 RFX4Q33E94 735 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ASPRV1Q53RT3 343 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ARMCX4Q5H9R4 360 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 C12orf60Q5U649 245 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PIK3R6Q5UE93 754 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SEL1L3Q68CR1 1132 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLFN13Q68D06 897 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PLA2G4FQ68DD2 849 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 LMBRD2Q68DH5 695 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 DENND5BQ6ZUT9 1274 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 LRP10Q7Z4F1 713 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 STRA8Q7Z7C7 330 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 CDH24Q86UP0 819 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SNX32Q86XE0 403 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 KIF18BQ86Y91 864 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 THNSL1Q8IYQ7 743 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 C8orf59Q8N0T1 100 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 NDUFAF2Q8N183 169 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 THEMISQ8N1K5 641 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 CLEC4FQ8N1N0 589 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 KCT2Q8NC54 265 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SETD9Q8NE22 299 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF555Q8NEP9 628 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 FLCNQ8NFG4 579 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 KBTBD8Q8NFY9 601 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR6Q1Q8NGQ2 317 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 RHOXF1Q8NHV9 184 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 FBXO27Q8NI29 283 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 CYGBQ8WWM9 190 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ATG4AQ8WYN0 398 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC5A5Q92911 643 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 GPKOWQ92917 476 aaPredicted RBP eCLIP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SHISA4Q96DD7 197 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRR11Q96HE9 360 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZFYVE19Q96K21 471 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 EGLN2Q96KS0 407 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM20AQ96MK3 541 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 NT5C1BQ96P26 610 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ASB2Q96Q27 587 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SENP7Q9BQF6 1050 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 BDH2Q9BUT1 245 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC25A23Q9BV35 468 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 CALN1Q9BXU9 219 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 MTMR12Q9C0I1 747 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRIT1Q9H3H1 467 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ATP13A3Q9H7F0 1226 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 NIPAL2Q9H841 368 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZFAND3Q9H8U3 227 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TUFT1Q9NNX1 390 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ING3Q9NXR8 418 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TAS2R7Q9NYW3 318 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADA2Q9NZK5 511 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PAK5Q9P286 719 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 HMGXB4Q9UGU5 601 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAD2L2Q9UI95 211 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PHF11Q9UIL8 331 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADAM28Q9UKQ2 775 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 AGO2Q9UKV8 859 aaKnown RBP5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMCC3Q9ULS5 477 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 BTBD3Q9Y2F9 522 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF175Q9Y473 711 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PCDHB12Q9Y5F1 795 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ORC6Q9Y5N6 252 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 PEX16Q9Y5Y5 336 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 RICTORQ6R327 1708 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 ASTN1O14525 1302 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SPATA31A5Q5VU36 1347 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 SPATA31A7Q8IWB4 1347 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAST2Q6P0Q8 1798 aa5.67□□□□□ -1.5
VTI1BP4-201ENST00000427516 CICQ96RK0 1608 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 RBBP6Q7Z6E9 1792 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 A0A0B4J269 797 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 hCG_1642624A0A1W2PR95 340 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TCRBV9S1A1TA0A576 114 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 EFCAB10A6NFE3 127 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TUBAL3A6NHL2 446 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ACOT8O14734 319 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TLR3O15455 904 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 KCNJ13O60928 360 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SEC24DO94855 1032 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZIC2O95409 532 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC4A1P02730 911 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CALB1P05937 261 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMEM191BP0C7N4 346 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ENO3P13929 434 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ITGA2P17301 1181 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 RCVRNP35243 200 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 RPL22P35268 128 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SOX6P35712 828 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 RPS9P46781 194 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 NDST1P52848 882 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CTSWP56202 376 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 AP1S2P56377 157 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SIK1P57059 783 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR2B6P58173 313 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SSTP61278 116 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CSNK2BP67870 215 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms