RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SETD7Q8WTS6 366 aaKnown RBP12.93□□□□□ -0.34
GPC1-204ENST00000426280 TSC1Q92574 1164 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 CCDC114Q96M63 670 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 CCDC42Q96M95 316 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 SLC32A1Q9H598 525 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 PCDH18Q9HCL0 1135 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 PREBQ9HCU5 417 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
GPC1-204ENST00000426280 ANAPC7Q9UJX3 599 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 KLK13Q9UKR3 277 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 HPCAL4Q9UM19 191 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 SCINQ9Y6U3 715 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 CACNA1EQ15878 2313 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 CXorf51AA0A1B0GTR3 108 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 POM121BA6NF01 834 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 IGLON5A6NGN9 336 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 SOWAHDA6NJG2 315 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 FGF10O15520 208 aaPredicted RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 POP4O95707 220 aaKnown RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 PEX11BO96011 259 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 PRKCGP05129 697 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 HCAR3P49019 387 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 NEK3P51956 506 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 NDST2P52849 883 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 C21orf59P57076 290 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 SNRPD1P62314 119 aaKnown RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 SHC2P98077 582 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 DPYSL2Q16555 572 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 PARP15Q460N3 678 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 INO80DQ53TQ3 878 aaPredicted RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 ZNF805Q5CZA5 627 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 GDPD4Q6W3E5 623 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 GCNT7Q6ZNI0 430 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 NYAP1Q6ZVC0 841 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 MFSD2AQ8NA29 543 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 TSEN2Q8NCE0 465 aaKnown RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 SAP25Q8TEE9 199 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 LRRN4Q8WUT4 740 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 FUBP1Q96AE4 644 aaKnown RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 TRIM11Q96F44 468 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 PANX2Q96RD6 677 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 ELF4Q99607 663 aaPredicted RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 KLF6Q99612 283 aaPredicted RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 SCNM1Q9BWG6 230 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 IMPACTQ9P2X3 320 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 UBA2Q9UBT2 640 aaPredicted RBP12.92□□□□□ -0.34
GPC1-204ENST00000426280 PCNX2A6NKB5 2137 aa12.92□□□□□ -0.34
GPC1-204ENST00000426280 C1QTNF9BB2RNN3 333 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 PRAMEF26H0Y7S4 382 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 DFFAO00273 331 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 AREL1O15033 823 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 DAPK3O43293 454 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 SDC3O75056 442 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 FTH1P19P0C7X4 201 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 C1QTNF9P0C862 333 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 FECHP22830 423 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 RHOAP61586 193 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 SLC10A7Q0GE19 358 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 PIGHQ14442 188 aaPredicted RBP12.91□□□□□ -0.34
GPC1-204ENST00000426280 STAT4Q14765 748 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 NEK5Q6P3R8 708 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 FBXL19Q6PCT2 694 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 RAD9BQ6WBX8 426 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 CAMK1DQ8IU85 385 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 TMEM139Q8IV31 216 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 SLC22A18ASQ8N1D0 253 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 PGBD5Q8N414 524 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 NIPA2Q8N8Q9 360 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 OR13H1Q8NG92 308 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 CSPG4P5Q96PW8 444 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 SLC17A9Q9BYT1 436 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 DYRK4Q9NR20 520 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.91□□□□□ -0.34
GPC1-204ENST00000426280 KLHL11Q9NVR0 708 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 ANGPTL2Q9UKU9 493 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 TFR2Q9UP52 801 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 DMTF1Q9Y222 760 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 PCDHGB2Q9Y5G2 931 aa12.91□□□□□ -0.34
GPC1-204ENST00000426280 CNOT1A5YKK6 2376 aaKnown RBP12.91□□□□□ -0.34
GPC1-204ENST00000426280 GOLGA8CPA6NN73 597 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 AP1G1O43747 822 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 PCDHGA12O60330 932 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 MMP20O60882 483 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 H2AFZP0C0S5 128 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 THEGLP0DJG4 465 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 HTR7P34969 479 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 CCT8P50990 548 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 CLDN6P56747 220 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
GPC1-204ENST00000426280 IHHQ14623 411 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 ACAP1Q15027 740 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 PTPRRQ15256 657 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 SETMARQ53H47 684 aaPredicted RBP12.9□□□□□ -0.34
GPC1-204ENST00000426280 BOLA3Q53S33 107 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 ZNF542PQ5EBM4 170 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 H2AFVQ71UI9 128 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 TTC7BQ86TV6 843 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 PSTKQ8IV42 348 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms