RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 IRF3Q14653 427 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 FCRLBQ6BAA4 426 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 KLHL35Q6PF15 583 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 CYB5R4Q7L1T6 521 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 CCDC25Q86WR0 208 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.02□□□□□ -1.61
LINC00400-201ENST00000425609 FAM98AQ8NCA5 519 aaKnown RBP5.02□□□□□ -1.61
LINC00400-201ENST00000425609 BCAS4Q8TDM0 211 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 WIPF2Q8TF74 440 aaPredicted RBP5.02□□□□□ -1.61
LINC00400-201ENST00000425609 PSPC1Q8WXF1 523 aaKnown RBP5.02□□□□□ -1.61
LINC00400-201ENST00000425609 MXD3Q9BW11 206 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 FTOQ9C0B1 505 aaKnown RBP eCLIP5.02□□□□□ -1.61
LINC00400-201ENST00000425609 PLEKHA4Q9H4M7 779 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 FBRSL1Q9HCM7 1045 aaKnown RBP5.02□□□□□ -1.61
LINC00400-201ENST00000425609 ABI3Q9P2A4 366 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 KIAA0586Q9BVV6 1533 aa5.02□□□□□ -1.61
LINC00400-201ENST00000425609 PASKQ96RG2 1323 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 A0A1W2PRG0 241 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 LRRC53A6NM62 1247 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 NPIPB11E5RHQ5 1161 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 SNAP23O00161 211 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 EBAG9O00559 213 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 P4HA2O15460 535 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 TSPAN9O75954 239 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 LCKP06239 509 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 SLC2A4P14672 509 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 RYKP34925 604 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 KRT20P35900 424 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 GABRB2P47870 512 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 CENPAP49450 140 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 HDAC4P56524 1084 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 CLDN2P57739 230 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 COL10A1Q03692 680 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 CSTF3Q12996 717 aaKnown RBP5.01□□□□□ -1.61
LINC00400-201ENST00000425609 DPCR1Q3MIW9 517 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 EARS2Q5JPH6 523 aaKnown RBP5.01□□□□□ -1.61
LINC00400-201ENST00000425609 PLEKHS1Q5SXH7 462 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 CFAP58Q5T655 872 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 FBXO42Q6P3S6 717 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 ADGRF2Q8IZF7 708 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 CADM3Q8N126 398 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 GPR150Q8NGU9 434 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 GTF3C6Q969F1 213 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 SMARCE1Q969G3 411 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 MMABQ96EY8 250 aaPredicted RBP5.01□□□□□ -1.61
LINC00400-201ENST00000425609 CLMNQ96JQ2 1002 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 H2AFJQ9BTM1 129 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 SPATS2LQ9NUQ6 558 aaKnown RBP5.01□□□□□ -1.61
LINC00400-201ENST00000425609 CTNNAL1Q9UBT7 734 aa5.01□□□□□ -1.61
LINC00400-201ENST00000425609 IPO11Q9UI26 975 aaKnown RBP5.01□□□□□ -1.61
LINC00400-201ENST00000425609 POLR2AP24928 1970 aaKnown RBP5.01□□□□□ -1.61
LINC00400-201ENST00000425609 FOXO6A8MYZ6 492 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 MYO1GB0I1T2 1018 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 TMCC1O94876 653 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 TFP02787 698 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 HOXB5P09067 269 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 PTPN2P17706 415 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 IL11P20809 199 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 YWHAQP27348 245 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 CDAP32320 146 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 DPP6P42658 865 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 PIP4K2AP48426 406 aaPredicted RBP5□□□□□ -1.61
LINC00400-201ENST00000425609 PTH2RP49190 550 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 GNAQP50148 359 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 CLCNKBP51801 687 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 SNX16P57768 344 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 PROK1P58294 105 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 IFI35P80217 286 aaPredicted RBP5□□□□□ -1.61
LINC00400-201ENST00000425609 NIPAL4Q0D2K0 466 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 AIMP2Q13155 320 aaKnown RBP5□□□□□ -1.61
LINC00400-201ENST00000425609 FRG1Q14331 258 aaKnown RBP5□□□□□ -1.61
LINC00400-201ENST00000425609 LCE4AQ5TA78 99 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 MEX3CQ5U5Q3 659 aaKnown RBP5□□□□□ -1.61
LINC00400-201ENST00000425609 AAGABQ6PD74 315 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 SARM1Q6SZW1 724 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 MRGPRGQ86SM5 289 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 ARHGEF25Q86VW2 580 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 DHX40Q8IX18 779 aaKnown RBP5□□□□□ -1.61
LINC00400-201ENST00000425609 TMTC2Q8N394 836 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 PABPC5Q96DU9 382 aaKnown RBP5□□□□□ -1.61
LINC00400-201ENST00000425609 CALML4Q96GE6 196 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 FEM1CQ96JP0 617 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 CMTM3Q96MX0 182 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 SLF1Q9BQI6 1058 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 KAT14Q9H8E8 782 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 WDR6Q9NNW5 1121 aaKnown RBP5□□□□□ -1.61
LINC00400-201ENST00000425609 SPAG4Q9NPE6 437 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 ASAH2Q9NR71 780 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 SLC6A13Q9NSD5 602 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 LAMP3Q9UQV4 416 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 TMEM5Q9Y2B1 443 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 CARMIL1Q5VZK9 1371 aa5□□□□□ -1.61
LINC00400-201ENST00000425609 CUL7Q14999 1698 aa4.99□□□□□ -1.61
LINC00400-201ENST00000425609 PTPRGP23470 1445 aa4.99□□□□□ -1.61
LINC00400-201ENST00000425609 DDTLA6NHG4 134 aaPredicted RBP4.99□□□□□ -1.61
LINC00400-201ENST00000425609 FAM90A8PA6NJQ4 464 aa4.99□□□□□ -1.61
LINC00400-201ENST00000425609 LRRC3CA6NJW4 275 aa4.99□□□□□ -1.61
LINC00400-201ENST00000425609 TTC36A6NLP5 189 aa4.99□□□□□ -1.61
LINC00400-201ENST00000425609 LINC01548A6NM66 108 aa4.99□□□□□ -1.61
LINC00400-201ENST00000425609 USP17L23D6RBM5 183 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms