RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 OR2AP1Q8NGE2 309 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CASKIN2Q8WXE0 1202 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TMEM159Q96B96 161 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TBCBQ99426 244 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CCDC3Q9BQI4 270 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TM6SF2Q9BZW4 377 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FCF1Q9Y324 198 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 BECN2A8MW95 431 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 FOXN3O00409 490 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PLD2O14939 933 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 YY2O15391 372 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RASGRP1O95267 797 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 GSRP00390 522 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TNFP01375 233 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TPM2P07951 284 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RHOQP17081 205 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PON1P27169 355 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 GABRB2P47870 512 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 IRAK1P51617 712 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PFN3P60673 137 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 C1orf61Q13536 156 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RAPGEF1Q13905 1077 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PARS2Q7L3T8 475 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RAB11FIP2Q7L804 512 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ARCQ7LC44 396 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PRICKLE2Q7Z3G6 844 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 NT5C3BQ969T7 300 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 LIN37Q96GY3 246 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 GDAP1L1Q96MZ0 367 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KLHL32Q96NJ5 620 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 BOCQ9BWV1 1114 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 EPB41L5Q9HCM4 733 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 OR12D3Q9UGF7 316 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SEPT3Q9UH03 358 aa12.45□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PLXNA2O75051 1894 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SHROOM3Q8TF72 1996 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ANKRD62A6NC57 917 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 GOLGA8SH3BPF8 625 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 BUB1O43683 1085 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RAMP2O60895 175 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 LSM8O95777 96 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 IGSF6O95976 241 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 UGT2B4P06133 528 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KELP23276 732 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SDC4P31431 198 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 BIRC2Q13490 618 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 LRRC14Q15048 493 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PTPN20Q4JDL3 420 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ERAP2Q6P179 960 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CRTC1Q6UUV9 634 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 MACC1Q6ZN28 852 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RD3Q7Z3Z2 195 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CLEC14AQ86T13 490 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SLC47A2Q86VL8 602 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ARL10Q8N8L6 244 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TTC9Q92623 222 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 GPR27Q9NS67 375 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 DACH1Q9UI36 760 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 GPR34Q9UPC5 381 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PCDHGA7Q9Y5G6 932 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ASPMQ8IZT6 3477 aa12.44□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CDRT15L2A8MXV6 281 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PDE2AO00408 941 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 RAD51BO15315 384 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ARHGAP6O43182 974 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ZMPSTE24O75844 475 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ITGB2P05107 769 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TSHRP16473 764 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CLCN1P35523 988 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CSRP3P50461 194 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ATP11AP98196 1134 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 EIF2B5Q13144 721 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PEX6Q13608 980 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ARHGEF7Q14155 803 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SYCP1Q15431 976 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 MAN2A1Q16706 1144 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 INO80DQ53TQ3 878 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 MANEAQ5SRI9 462 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KIAA1614Q5VZ46 1190 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ENPP7Q6UWV6 458 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ATG14Q6ZNE5 492 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 FAM131BQ86XD5 332 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ZNF677Q86XU0 584 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 HID1Q8IV36 788 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 FAM71AQ8IYT1 594 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 HCAR2Q8TDS4 363 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ARHGEF2Q92974 986 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CENPTQ96BT3 561 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TBC1D31Q96DN5 1066 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 SGF29Q96ES7 293 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 KLF6Q99612 283 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 CMKLR1Q99788 373 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 EDEM3Q9BZQ6 932 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 TTYH3Q9C0H2 523 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 PLCB1Q9NQ66 1216 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 DNAI1Q9UI46 699 aa12.43□□□□□ -0.42
HLA-DQB3-203ENST00000425319 ATXN7L1Q9ULK2 861 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms