RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 DNA2P51530 1060 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 ARSDP51689 593 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 CASP5P51878 434 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 HK3P52790 923 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 PFN3P60673 137 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 YPEL5P62699 121 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 PPP2R2AP63151 447 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 CYP24A1Q07973 514 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 CHAF1BQ13112 559 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 TRA2AQ13595 282 aaKnown RBP eCLIP6.43□□□□□ -1.38
SDCBP-203ENST00000424270 SLC12A1Q13621 1099 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 PSMD6Q15008 389 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 CHRNA6Q15825 494 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 ME3Q16798 604 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 SGSM1Q2NKQ1 1148 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 CRTC2Q53ET0 693 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-203ENST00000424270 ZNF394Q53GI3 561 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 FAM133BQ5BKY9 247 aaKnown RBP6.43□□□□□ -1.38
SDCBP-203ENST00000424270 MS4A13Q5J8X5 152 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 BSPRYQ5W0U4 402 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 PIGZQ86VD9 579 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 RYBPQ8N488 228 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-203ENST00000424270 ATL2Q8NHH9 583 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 FRS2Q8WU20 508 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 KCTD13Q8WZ19 329 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 STAMBPL1Q96FJ0 436 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 AHCYL2Q96HN2 611 aaKnown RBP6.43□□□□□ -1.38
SDCBP-203ENST00000424270 LMLNQ96KR4 655 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 AK8Q96MA6 479 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 MUC3BQ9H195 1237 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 NUCKS1Q9H1E3 243 aaKnown RBP6.43□□□□□ -1.38
SDCBP-203ENST00000424270 SUDS3Q9H7L9 328 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-203ENST00000424270 BLOC1S4Q9NUP1 217 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 ASF1BQ9NVP2 202 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 OCIAD1Q9NX40 245 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 IL36AQ9UHA7 158 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 MOSPD1Q9UJG1 213 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 OSGIN2Q9Y236 505 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 SVILO95425 2214 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 RP1L1Q8IWN7 2480 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-203ENST00000424270 RP1P56715 2156 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 NAV3Q8IVL0 2385 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ZSCAN5CA6NGD5 496 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ARGFXA6NJG6 315 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 TMEM200CA6NKL6 621 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 B4E171 279 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 F5H423 210 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 F5H5T6 163 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 SLC26A4O43511 780 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 NUDT21O43809 227 aaKnown RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 EIF5BO60841 1220 aaKnown RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 APOEP02649 317 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 CTSLP07711 333 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 LCP1P13796 627 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ADRB3P13945 408 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 BPIP17213 487 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 SSTR2P30874 369 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 TSPAN7P41732 249 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 STAT5AP42229 794 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 CASP4P49662 377 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 TOB1P50616 345 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ART1P52961 327 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 LIMK2P53671 638 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ADIGQ0VDE8 80 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 TESK1Q15569 626 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 NKAIN2Q5VXU1 208 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 RAP1GAP2Q684P5 730 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 NADSYN1Q6IA69 706 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 SV2BQ7L1I2 683 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ZSCAN30Q86W11 494 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 CIR1Q86X95 450 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 RHOT1Q8IXI2 618 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 CCDC150Q8NCX0 1101 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 DENND6BQ8NEG7 585 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 TMIEQ8NEW7 156 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 KIAA1524Q8TCG1 905 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 CHTF18Q8WVB6 975 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 PNPLA2Q96AD5 504 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 SNRNP40Q96DI7 357 aaKnown RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 RTP4Q96DX8 246 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 LENG8Q96PV6 779 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 TWNKQ96RR1 684 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ZPBPQ9BS86 351 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 HDAC8Q9BY41 377 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 TRIM55Q9BYV6 548 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ULBP3Q9BZM4 244 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ILKAPQ9H0C8 392 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 TNKS2Q9H2K2 1166 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 CHST11Q9NPF2 352 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.42□□□□□ -1.38
SDCBP-203ENST00000424270 PANK4Q9NVE7 773 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 CCDC39Q9UFE4 941 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 SDK2Q58EX2 2172 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 MED13LQ71F56 2210 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 MTORP42345 2549 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 APCP25054 2843 aa6.42□□□□□ -1.38
SDCBP-203ENST00000424270 ZNF106Q9H2Y7 1883 aaKnown RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 SCN8AQ9UQD0 1980 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 A6NL46 340 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 YJEFN3A6XGL0 299 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms