RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ZNF564Q8TBZ8 553 aaPredicted RBP18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 TSC1Q92574 1164 aa18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 EXOC2Q96KP1 924 aa18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 ELF4Q99607 663 aaPredicted RBP18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 MYOCQ99972 504 aa18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 PCDH18Q9HCL0 1135 aa18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 FZD3Q9NPG1 666 aa18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 UBA2Q9UBT2 640 aaPredicted RBP18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 ITM2BQ9Y287 266 aa18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 LRRK1Q38SD2 2015 aa18.09■□□□□ 0.49
SBDSP1-202ENST00000423945 FRYQ5TBA9 3013 aa18.08■□□□□ 0.49
SBDSP1-202ENST00000423945 ARHGAP42A6NI28 874 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 PRAMEF26H0Y7S4 382 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 PCDHGA12O60330 932 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 PCDH8O95206 1070 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 IGSF6O95976 241 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 SPINK2P20155 84 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 CCT8P50990 548 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 FOXC1Q12948 553 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 TRIP6Q15654 476 aaKnown RBP18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 FBXL19Q6PCT2 694 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 SARM1Q6SZW1 724 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 GDPD4Q6W3E5 623 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 GCNT7Q6ZNI0 430 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 FAM71BQ8TC56 605 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 TEKT4Q8WW24 435 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 CNTNAP3BQ96NU0 1288 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 CSPG4P5Q96PW8 444 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 OSBPL1AQ9BXW6 950 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 CNTNAP3Q9BZ76 1288 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 CAAP1Q9H8G2 361 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 DONSONQ9NYP3 566 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 ANGPTL2Q9UKU9 493 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 AKAP13Q12802 2813 aa18.08■□□□□ 0.48
SBDSP1-202ENST00000423945 ARID1BQ8NFD5 2236 aaPredicted RBP18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 H3BRJ5 948 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 MYO1FO00160 1098 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 AREL1O15033 823 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 FLRT2O43155 660 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 PIGNO95427 931 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 CD48P09326 243 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 ITIH2P19823 946 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 IL4RP24394 825 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 ARSEP51690 589 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 HNRNPDQ14103 355 aaKnown RBP18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 ATP13A4Q4VNC1 1196 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 LRRC73Q5JTD7 316 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 IQCHQ86VS3 1027 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 SETD7Q8WTS6 366 aaKnown RBP18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 NSMCE3Q96MG7 304 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 CTTNBP2NLQ9P2B4 639 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 SHROOM3Q8TF72 1996 aa18.07■□□□□ 0.48
SBDSP1-202ENST00000423945 DFFAO00273 331 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 MUSKO15146 869 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 RAD51BO15315 384 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 DFNA5O60443 496 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 BUB1BO60566 1050 aaPredicted RBP18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 PROSCO94903 275 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 PEX11BO96011 259 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 H2AFZP0C0S5 128 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 ARL4AP40617 200 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 CLDN2P57739 230 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 TAS2R40P59535 323 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 MMRN1Q13201 1228 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 STAT4Q14765 748 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 SLC45A4Q5BKX6 768 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 KIAA1161Q6NSJ0 714 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 H2AFVQ71UI9 128 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 KANSL1Q7Z3B3 1105 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 GLRX5Q86SX6 157 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 GATAD2AQ86YP4 633 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 TSEN2Q8NCE0 465 aaKnown RBP18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 SAP25Q8TEE9 199 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 RAB7BQ96AH8 199 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 SKA1Q96BD8 255 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 KLF6Q99612 283 aaPredicted RBP18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 C1QTNF2Q9BXJ5 285 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 CPEB1Q9BZB8 566 aaKnown RBP18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 ERVMER34-1Q9H9K5 563 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 NHEJ1Q9H9Q4 299 aaPredicted RBP18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 GDF3Q9NR23 364 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 SPTLC3Q9NUV7 552 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 TOR4AQ9NXH8 423 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 UVRAGQ9P2Y5 699 aa18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 IPO11Q9UI26 975 aaKnown RBP18.06■□□□□ 0.48
SBDSP1-202ENST00000423945 COL5A1P20908 1838 aaPredicted RBP18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 TMEM253P0C7T8 217 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 FTH1P19P0C7X4 201 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 TIMP2P16035 220 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 HNRNPA2B1P22626 353 aaKnown RBP18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 RXRGP48443 463 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 RPS21P63220 83 aaKnown RBP18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 IL10RBQ08334 325 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 OVGP1Q12889 678 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 BNIP3Q12983 259 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 KDM7AQ6ZMT4 941 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 ABI3BPQ7Z7G0 1075 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 SLCO6A1Q86UG4 719 aa18.05■□□□□ 0.48
SBDSP1-202ENST00000423945 ZSWIM9Q86XI8 627 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms