RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 ZC3H12BQ5HYM0 836 aaKnown RBP5.96□□□□□ -1.46
LINC00458-201ENST00000423442 PRAMEF9Q5VWM5 478 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 PARM1Q6UWI2 310 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 TRAPPC11Q7Z392 1133 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 CXorf67Q86X51 503 aaPredicted RBP5.96□□□□□ -1.46
LINC00458-201ENST00000423442 C12orf56Q8IXR9 622 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 EFCAB13Q8IY85 973 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 ADGRF2Q8IZF7 708 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 PDCL2Q8N4E4 241 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 ITFG1Q8TB96 612 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 CPT1CQ8TCG5 803 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 CSGALNACT1Q8TDX6 532 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 THAP3Q8WTV1 239 aaPredicted RBP5.96□□□□□ -1.46
LINC00458-201ENST00000423442 ST8SIA2Q92186 375 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 SMARCD2Q92925 531 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 SMARCE1Q969G3 411 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 PSMG2Q969U7 264 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 EXOC4Q96A65 974 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 ELSPBP1Q96BH3 223 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 GSDMAQ96QA5 445 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 KXD1Q9BQD3 176 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 OSBPL6Q9BZF3 934 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 ZCWPW1Q9H0M4 648 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 BRD9Q9H8M2 597 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 LTB4R2Q9NPC1 389 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 SIRPGQ9P1W8 387 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 UXTQ9UBK9 157 aaPredicted RBP5.96□□□□□ -1.46
LINC00458-201ENST00000423442 GTF3C4Q9UKN8 822 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 CDH9Q9ULB4 789 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 RAB23Q9ULC3 237 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 MAGED2Q9UNF1 606 aaPredicted RBP5.96□□□□□ -1.46
LINC00458-201ENST00000423442 HPSEQ9Y251 543 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 HS3ST4Q9Y661 456 aa5.96□□□□□ -1.46
LINC00458-201ENST00000423442 FASNP49327 2511 aaKnown RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 MTMR11A4FU01 709 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 A8MXQ7 604 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 CETN3O15182 167 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 KLRC4O43908 158 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 NR3C1P04150 777 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 RETP07949 1114 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 HAPLN1P10915 354 aaPredicted RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 PSMC3P17980 439 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 HOXD13P35453 343 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 AVPR1AP37288 418 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 PPP1R2P41236 205 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 MAGEA9P43362 315 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 VAMP7P51809 220 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 SHC2P98077 582 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 MTAPQ13126 283 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 SPIDRQ14159 915 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 KCNB1Q14721 858 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 CSRP2Q16527 193 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 BMT2Q1RMZ1 405 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 SOWAHAQ2M3V2 549 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 FAM214AQ32MH5 1076 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 ZNF667Q5HYK9 610 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 LMBRD2Q68DH5 695 aaPredicted RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 NAIF1Q69YI7 327 aaPredicted RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 ZNF852Q6ZMS4 543 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 INTS8Q75QN2 995 aaKnown RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 SCN4BQ8IWT1 228 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 CMTM4Q8IZR5 234 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 ZSWIM2Q8NEG5 633 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 OR5B17Q8NGF7 314 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 PARD3BQ8TEW8 1205 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 MRPS31Q92665 395 aaKnown RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 TAF4BQ92750 862 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 CLDN23Q96B33 292 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 ZNF764Q96H86 408 aaPredicted RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 TNIP3Q96KP6 325 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 TIGD1Q96MW7 591 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 NOTCH4Q99466 2003 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 CGRRF1Q99675 332 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 MED10Q9BTT4 135 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 PI4K2AQ9BTU6 479 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 FAM126AQ9BYI3 521 aaPredicted RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 FGFBP2Q9BYJ0 223 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 ZNF768Q9H5H4 540 aaKnown RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 TRIM39Q9HCM9 518 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 PRMT8Q9NR22 394 aaPredicted RBP5.95□□□□□ -1.46
LINC00458-201ENST00000423442 PTGFRNQ9P2B2 879 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 YIPF1Q9Y548 306 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 ATP8B3O60423 1300 aa5.95□□□□□ -1.46
LINC00458-201ENST00000423442 SETXQ7Z333 2677 aaKnown RBP5.94□□□□□ -1.46
LINC00458-201ENST00000423442 ZFYVE26Q68DK2 2539 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 FAM237AA0A1B0GTK4 181 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 PSMA7O14818 248 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 MAPK13O15264 365 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 DAPK3O43293 454 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 LRP3O75074 770 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 SOAT2O75908 522 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 EPB41P11171 864 aaKnown RBP5.94□□□□□ -1.46
LINC00458-201ENST00000423442 TDGF1P13385 188 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 NR2F2P24468 414 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 ACAT1P24752 427 aaKnown RBP5.94□□□□□ -1.46
LINC00458-201ENST00000423442 CYP2F1P24903 491 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 DDX6P26196 483 aaKnown RBP eCLIP5.94□□□□□ -1.46
LINC00458-201ENST00000423442 GABRR2P28476 465 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 GDI1P31150 447 aa5.94□□□□□ -1.46
LINC00458-201ENST00000423442 KIR2DL3P43628 341 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms