RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 STX5Q13190 355 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 TMEM132DQ14C87 1099 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 AMHR2Q16671 573 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 C16orf87Q6PH81 154 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 ERMP1Q7Z2K6 904 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 DHFR2Q86XF0 187 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 MFSD6LQ8IWD5 586 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 TXNDC5Q8NBS9 432 aaKnown RBP16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 DDHD1Q8NEL9 900 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 DQX1Q8TE96 717 aaKnown RBP16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 RNF139Q8WU17 664 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 ERLEC1Q96DZ1 483 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 LRCH3Q96II8 777 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 TSNARE1Q96NA8 513 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 NEURL2Q9BR09 285 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 POLR1BQ9H9Y6 1135 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 SARDHQ9UL12 918 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 FZD10Q9ULW2 581 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 MRASO14807 208 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 MYF6P23409 242 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 PTPN3P26045 913 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 YAP1P46937 504 aaKnown RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 BMXP51813 675 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 CSE1LP55060 971 aaKnown RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 TNK2Q07912 1038 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 NME3Q13232 169 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 SLC26A9Q7LBE3 791 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 NT5DC4Q86YG4 428 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 PSTKQ8IV42 348 aaKnown RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ADAMTS16Q8TE57 1224 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 AKT1S1Q96B36 256 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 DUS3LQ96G46 650 aaKnown RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ABHD8Q96I13 439 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 EFHD1Q9BUP0 239 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 MLPHQ9BV36 600 aaPredicted RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 SOX17Q9H6I2 414 aaPredicted RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 TRNAU1APQ9NX07 287 aaKnown RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 DPP3Q9NY33 737 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 TMEM181Q9P2C4 612 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 KIAA1257Q9ULG3 409 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 SCN1AP35498 2009 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 IGKV6-21A0A0C4DH24 114 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ZNF182P17025 639 aaPredicted RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ADORA2BP29275 332 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 MERTKQ12866 999 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ANKRD52Q8NB46 1076 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 CYGBQ8WWM9 190 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 GPR78Q96P69 363 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 CASS4Q9NQ75 786 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 TRPC5OSA6NMA1 111 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ZBTB24O43167 697 aaPredicted RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 IDO1P14902 403 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 DCKP27707 260 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 LRPAP1P30533 357 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 NME5P56597 212 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 YBX1P67809 324 aaKnown RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 NEDD8Q15843 81 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ZNF280DQ6N043 979 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ANKRD26P1Q6NSI1 321 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 OR2T34Q8NGX1 318 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 OR2T3Q8NH03 318 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 SEPT1Q8WYJ6 367 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 DOK1Q99704 481 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 GPATCH1Q9BRR8 931 aaKnown RBP16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 DNAI2Q9GZS0 605 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 IL1RL2Q9HB29 575 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 CYP4F12Q9HCS2 524 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 ANKRD6Q9Y2G4 727 aa16.84■□□□□ 0.29
NPC1L1-203ENST00000423141 UBDO15205 165 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 AHSGP02765 367 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 ALDH2P05091 517 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 CD68P34810 354 aaPredicted RBP16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 MPP1Q00013 466 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 SLC12A1Q13621 1099 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 TBCELQ5QJ74 424 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 DENND6AQ8IWF6 608 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 POMKQ9H5K3 350 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 MRPL40Q9NQ50 206 aaKnown RBP16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 ADAMTS5Q9UNA0 930 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 SNRPB2P08579 225 aaKnown RBP16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 ZNF12P17014 697 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 YWHAQP27348 245 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 RBP5P82980 135 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 SAMD4BQ5PRF9 694 aaKnown RBP16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 SMYD5Q6GMV2 418 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 SPPL2CQ8IUH8 684 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 ZC3H7AQ8IWR0 971 aaKnown RBP16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 SLC15A4Q8N697 577 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 MFSD2AQ8NA29 543 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 TNIP2Q8NFZ5 429 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 RHOJQ9H4E5 214 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 RNF19AQ9NV58 838 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 EGFL7Q9UHF1 273 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 PTBP2Q9UKA9 531 aaKnown RBP16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 CROTQ9UKG9 612 aa16.83■□□□□ 0.28
NPC1L1-203ENST00000423141 EVPLQ92817 2033 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 TRIM64A6NGJ6 449 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 SRP72O76094 671 aaKnown RBP16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 KCNA5P22460 613 aa16.82■□□□□ 0.28
NPC1L1-203ENST00000423141 ACADVLP49748 655 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms