RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CCNB1P14635 433 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 TGM2P21980 687 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 XPAP23025 273 aaPredicted RBP15.96■□□□□ 0.15
BRAT1-202ENST00000421712 ITPKAP23677 461 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 ITGB7P26010 798 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 MAOBP27338 520 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 HSPA9P38646 679 aaKnown RBP15.96■□□□□ 0.15
BRAT1-202ENST00000421712 RGRP47804 291 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 NR2C2P49116 596 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 PEX5P50542 639 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 ADPRHP54922 357 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 NSUN2Q08J23 767 aaKnown RBP eCLIP15.96■□□□□ 0.15
BRAT1-202ENST00000421712 CCDC173Q0VFZ6 552 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 ZNF211Q13398 564 aaPredicted RBP15.96■□□□□ 0.15
BRAT1-202ENST00000421712 GRM3Q14832 879 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 PPP2R5EQ16537 467 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 TAZQ16635 292 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 WDR45BQ5MNZ6 344 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 TTC7BQ86TV6 843 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 SLC41A1Q8IVJ1 513 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.96■□□□□ 0.15
BRAT1-202ENST00000421712 OR2T34Q8NGX1 318 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 ALG3Q92685 438 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 HDAC11Q96DB2 347 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 TSGA13Q96PP4 275 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 PSKH2Q96QS6 385 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 HDAC8Q9BY41 377 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 OSBPL8Q9BZF1 889 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 KCNF1Q9H3M0 494 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 SCUBE2Q9NQ36 999 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 RBM22Q9NW64 420 aaKnown RBP eCLIP15.96■□□□□ 0.15
BRAT1-202ENST00000421712 SEPT10Q9P0V9 454 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 SAE1Q9UBE0 346 aaPredicted RBP15.96■□□□□ 0.15
BRAT1-202ENST00000421712 PCDHGA5Q9Y5G8 931 aa15.96■□□□□ 0.15
BRAT1-202ENST00000421712 RALGAPA1Q6GYQ0 2036 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 ATXN2Q99700 1313 aaKnown RBP15.95■□□□□ 0.14
BRAT1-202ENST00000421712 TTC24A2A3L6 582 aaPredicted RBP15.95■□□□□ 0.14
BRAT1-202ENST00000421712 BCLAF3A2AJT9 711 aaKnown RBP15.95■□□□□ 0.14
BRAT1-202ENST00000421712 MUSKO15146 869 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 ZSCAN12O43309 604 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 PCDH8O95206 1070 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 PEX11BO96011 259 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 PYGMP11217 842 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 MPLP40238 635 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 CSNK1DP48730 415 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 NEK3P51956 506 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 MAXP61244 160 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 BCL2L1Q07817 233 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 HNRNPDQ14103 355 aaKnown RBP15.95■□□□□ 0.14
BRAT1-202ENST00000421712 AGBL4Q5VU57 503 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 KIAA0895LQ68EN5 471 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 AADACL2Q6P093 401 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 B4GALNT4Q76KP1 1039 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 CPEB1Q9BZB8 566 aaKnown RBP15.95■□□□□ 0.14
BRAT1-202ENST00000421712 PCED1AQ9H1Q7 454 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 SUV39H2Q9H5I1 410 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 ATP13A3Q9H7F0 1226 aa15.95■□□□□ 0.14
BRAT1-202ENST00000421712 TRMT1Q9NXH9 659 aaKnown RBP15.95■□□□□ 0.14
BRAT1-202ENST00000421712 C16orf96A6NNT2 1141 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 KCNK1O00180 336 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 NEMP1O14524 444 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 DDX3YO15523 660 aaKnown RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 PLRG1O43660 514 aaKnown RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 TJP3O95049 919 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 JCHAINP01591 159 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 ADRB3P13945 408 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 GNSP15586 552 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 PECAM1P16284 738 aaPredicted RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 SERPINA4P29622 427 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 DPP6P42658 865 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 MAPK8P45983 427 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 ADCY2Q08462 1091 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 PPIDQ08752 370 aaKnown RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 RPS6KA1Q15418 735 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 PIP5KL1Q5T9C9 394 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 BBS12Q6ZW61 710 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 PARS2Q7L3T8 475 aaKnown RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 ZC3H18Q86VM9 953 aaKnown RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 CAMK1DQ8IU85 385 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 SYT12Q8IV01 421 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 PGBD5Q8N414 524 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 TEX26Q8N6G2 289 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 TRIM58Q8NG06 486 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 TFB1MQ8WVM0 346 aaKnown RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 BIRC7Q96CA5 298 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 HES6Q96HZ4 224 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 ZNF641Q96N77 438 aaPredicted RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 TUBGCP5Q96RT8 1024 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 MGME1Q9BQP7 344 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 BRD8Q9H0E9 1235 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 KDM4CQ9H3R0 1056 aa15.94■□□□□ 0.14
BRAT1-202ENST00000421712 EIF2B4Q9UI10 523 aaKnown RBP15.94■□□□□ 0.14
BRAT1-202ENST00000421712 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.93■□□□□ 0.14
BRAT1-202ENST00000421712 GOLGA6L9A6NEM1 432 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 H7C0C1 242 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 GJB3O75712 270 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 CFIP05156 583 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 MAT2AP31153 395 aaKnown RBP15.93■□□□□ 0.14
BRAT1-202ENST00000421712 ATP5OP48047 213 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 AP1S1P61966 158 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms