RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 LMO7DNF2Z398 122 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 GCATO75600 419 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 POP4O95707 220 aaKnown RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 LSM8O95777 96 aaKnown RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 GSRP00390 522 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 GKP32189 559 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 ACVRL1P37023 503 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 MLLT3P42568 568 aaPredicted RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 THOP1P52888 689 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 SNRPD1P62314 119 aaKnown RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 YPEL5P62699 121 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 NRG1Q02297 640 aaPredicted RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 RAPGEF1Q13905 1077 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 POLD3Q15054 466 aaPredicted RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 C2CD6Q53TS8 623 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 PRRT3Q5FWE3 981 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 PERM1Q5SV97 790 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 RBFAQ8N0V3 343 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 OR6K2Q8NGY2 324 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 ARHGEF2Q92974 986 aaKnown RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 NAT6Q93015 286 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 COL26A1Q96A83 441 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 OSBPL1AQ9BXW6 950 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 NDST4Q9H3R1 872 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 OR12D3Q9UGF7 316 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 APOBEC3BQ9UH17 382 aaKnown RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 GGT7Q9UJ14 662 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 ITM2BQ9Y287 266 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 K7ENP7 123 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 KRIT1O00522 736 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 AREL1O15033 823 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 MUSKO15146 869 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 ANXA6P08133 673 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 C6P13671 934 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 MAPKAPK2P49137 400 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 ADKP55263 362 aaKnown RBP17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 LY6DQ14210 128 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 MYLK3Q32MK0 819 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 C6orf132Q5T0Z8 1188 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 MANEALQ5VSG8 457 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 TAF3Q5VWG9 929 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 INO80CQ6PI98 192 aaPredicted RBP17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 CRTC1Q6UUV9 634 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 SLC35F3Q8IY50 421 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 PHACTR4Q8IZ21 702 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 ARL14Q8N4G2 192 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 MLKLQ8NB16 471 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 OR2AP1Q8NGE2 309 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 WDR36Q8NI36 951 aaKnown RBP17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 VOPP1Q96AW1 172 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 SLC13A1Q9BZW2 595 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 SEMA4CQ9C0C4 833 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 MAGEH1Q9H213 219 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 TCEAL2Q9H3H9 227 aaPredicted RBP17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 NDFIP2Q9NV92 336 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
UPF3AP3-201ENST00000420996 FAM170AA1A519 330 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 B8ZZF3 427 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 TOR1BO14657 336 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 UGT2B4P06133 528 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 RHOQP17081 205 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 ADRA1BP35368 520 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 IGFALSP35858 605 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 NOMO3P69849 1222 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 ATP11AP98196 1134 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 C1orf61Q13536 156 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 TPD52L1Q16890 204 aaPredicted RBP17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 ARL13BQ3SXY8 428 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 VWA3BQ502W6 1294 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 FAXCQ5TGI0 409 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 KLHDC7AQ5VTJ3 777 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 RWDD4Q6NW29 188 aaKnown RBP17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 CLEC14AQ86T13 490 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 TTC7BQ86TV6 843 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 NLRP14Q86W24 1093 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 FAM114A1Q8IWE2 563 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 CPA5Q8WXQ8 436 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 KLHL32Q96NJ5 620 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 LRRC61Q9BV99 259 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 C1QTNF7Q9BXJ2 289 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 TMEM248Q9NWD8 314 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 DNAI1Q9UI46 699 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 PNMA8BQ9ULN7 279 aaPredicted RBP17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 PADI4Q9UM07 663 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 FHOD1Q9Y613 1164 aa17.1■□□□□ 0.33
UPF3AP3-201ENST00000420996 CCDC187A0A096LP49 1063 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 PMS2P1A4D2B8 440 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 YY2O15391 372 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 TM7SF2O76062 418 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 TNFSF15O95150 251 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 EIF4A3P38919 411 aaKnown RBP17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 SPIDRQ14159 915 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 CAMK4Q16566 473 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 MIIPQ5JXC2 388 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 NAA35Q5VZE5 725 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 ESRP1Q6NXG1 681 aaKnown RBP17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 FOXR1Q6PIV2 292 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 GDPD4Q6W3E5 623 aa17.09■□□□□ 0.33
UPF3AP3-201ENST00000420996 MACC1Q6ZN28 852 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms