RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 ZNF805Q5CZA5 627 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 PIP5KL1Q5T9C9 394 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 GDPD4Q6W3E5 623 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 ERN2Q76MJ5 926 aaKnown RBP20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 ASCL5Q7RTU5 278 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 DEFB119Q8N690 84 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 HAUS1Q96CS2 278 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 TUBGCP5Q96RT8 1024 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 HDAC8Q9BY41 377 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 NT5MQ9NPB1 228 aa20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 TRMT1Q9NXH9 659 aaKnown RBP20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 EP300Q09472 2414 aaPredicted RBP20.9■□□□□ 0.94
HMGXB4-203ENST00000420166 KCNK1O00180 336 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 TJP3O95049 919 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 CR2P20023 1033 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 PLA2G5P39877 138 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 PTGER3P43115 390 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 MAPK8P45983 427 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 SCNN1BP51168 640 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 NEK3P51956 506 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 AP1S1P61966 158 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 IFI35P80217 286 aaPredicted RBP20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 CCDC15Q0P6D6 951 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 AP1B1Q10567 949 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 PRKD1Q15139 912 aaPredicted RBP20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 NOMO1Q15155 1222 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 CCDC181Q5TID7 509 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 PARS2Q7L3T8 475 aaKnown RBP20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 ARMCX6Q7L4S7 300 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 SLC41A1Q8IVJ1 513 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 CADM4Q8NFZ8 388 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 OR14C36Q8NHC7 312 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 FOXJ1Q92949 421 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 FAM122AQ96E09 287 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 HSPA12BQ96MM6 686 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 KLHL32Q96NJ5 620 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 NUDCD1Q96RS6 583 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 RBM22Q9NW64 420 aaKnown RBP eCLIP20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 AMACRQ9UHK6 382 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 GMEB2Q9UKD1 530 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 PI4KAP42356 2102 aa20.89■□□□□ 0.93
HMGXB4-203ENST00000420166 LRRC72A6NJI9 287 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 PLRG1O43660 514 aaKnown RBP20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 GJB3O75712 270 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 NEBLO76041 1014 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 EPN2O95208 641 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 PIGNO95427 931 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 MAXP61244 160 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 LYSMD4Q5XG99 296 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 NCEH1Q6PIU2 408 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 B4GALNT4Q76KP1 1039 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 ZC3H18Q86VM9 953 aaKnown RBP20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 OR2T34Q8NGX1 318 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 TFB1MQ8WVM0 346 aaKnown RBP20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 IL12RB2Q99665 862 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 TLR10Q9BXR5 811 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 C6orf106Q9H6K1 298 aaPredicted RBP20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 ATP13A3Q9H7F0 1226 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 HAUS2Q9NVX0 235 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 NCDNQ9UBB6 729 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 DKK3Q9UBP4 350 aa20.88■□□□□ 0.93
HMGXB4-203ENST00000420166 C16orf96A6NNT2 1141 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 METTL12A8MUP2 240 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 JCHAINP01591 159 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 RETP07949 1114 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 ADRB3P13945 408 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 TAS2R38P59533 333 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 OTUD4Q01804 1114 aaKnown RBP20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 ZBTB17Q13105 803 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 XRCC4Q13426 336 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 RALGPS1Q5JS13 557 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 SEL1L2Q5TEA6 688 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 ALG1LQ6GMV1 187 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 FBXL19Q6PCT2 694 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 CYP2U1Q7Z449 544 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 CAMK1DQ8IU85 385 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 ACTL9Q8TC94 416 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 NSMCE3Q96MG7 304 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 ZNF641Q96N77 438 aaPredicted RBP20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 QKIQ96PU8 341 aaKnown RBP eCLIP20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 CARD9Q9H257 536 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 KDM4CQ9H3R0 1056 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 SUV39H2Q9H5I1 410 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 NOD2Q9HC29 1040 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 SCUBE2Q9NQ36 999 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 PIEZO1Q92508 2521 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 DOCK9Q9BZ29 2069 aa20.87■□□□□ 0.93
HMGXB4-203ENST00000420166 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 TTC24A2A3L6 582 aaPredicted RBP20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 BCLAF3A2AJT9 711 aaKnown RBP20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 FAM47DPA6NHR8 397 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 USP27XA6NNY8 438 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 MEI4A8MW99 385 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 HACD1B0YJ81 288 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 C10orf142B7Z368 130 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 HLA-DQB2P05538 268 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 SERPINA4P29622 427 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 BCL2L1Q07817 233 aa20.86■□□□□ 0.93
HMGXB4-203ENST00000420166 KIAA0895LQ68EN5 471 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms