RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 C9IYK1 514 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 TMCC1O94876 653 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 CYP2C9P11712 490 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 GJA9P57773 515 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 FASTKQ14296 549 aaKnown RBP15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 UGP2Q16851 508 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 DNAJB3Q8WWF6 145 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 SLC2A13Q96QE2 648 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 NSMCE4AQ9NXX6 385 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 GALNT8Q9NY28 637 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 DMTF1Q9Y222 760 aa15.34■□□□□ 0.05
SEMA3B-203ENST00000419007 COL1A2P08123 1366 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 PFDN1O60925 122 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 HSPA13P48723 471 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 PRAMEP78395 509 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 PCSK7Q16549 785 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 PITRM1Q5JRX3 1037 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 TSTD2Q5T7W7 516 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 MAMDC4Q6UXC1 1216 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 ALKAL1Q6UXT8 129 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 TICAM1Q8IUC6 712 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 TMEM102Q8N9M5 508 aaPredicted RBP15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 OR6J1Q8NGC5 347 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 LPGAT1Q92604 370 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 SLC39A3Q9BRY0 314 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 TMEM79Q9BSE2 394 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 PAPPA2Q9BXP8 1791 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 C7orf72A4D263 438 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 AURKAO14965 403 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 EPHX2P34913 555 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 SLC1A2P43004 574 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 NME5P56597 212 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 DAOAP59103 153 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 TRIM25Q14258 630 aaKnown RBP15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 PKN3Q6P5Z2 889 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 TSPAN14Q8NG11 270 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 GRIN3AQ8TCU5 1115 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 TMEM40Q8WWA1 233 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 FSD1LQ9BXM9 530 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 RHOBTB2Q9BYZ6 727 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 SENP6Q9GZR1 1112 aaPredicted RBP15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 ZNF385DQ9H6B1 395 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 ZNF696Q9H7X3 374 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 LIN28AQ9H9Z2 209 aaKnown RBP15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 IL1RL2Q9HB29 575 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 VPS28Q9UK41 221 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 CEP350Q5VT06 3117 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 NRCAMQ92823 1304 aa15.33■□□□□ 0.04
SEMA3B-203ENST00000419007 PRKAA2P54646 552 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 NR1H2P55055 460 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 GALNT2Q10471 571 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 MTX3Q5HYI7 312 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 KIAA0319Q5VV43 1072 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 LINC00523Q86TU6 105 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 OR9I1Q8NGQ6 314 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 TBL1YQ9BQ87 522 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 KIFC1Q9BW19 673 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 NOL11Q9H8H0 719 aaKnown RBP15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 RHBDL2Q9NX52 303 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 A0A0G2JMZ2 1700 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 LRRC37A2A6NM11 1700 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 MYBPHLA2RUH7 354 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 PSMD12O00232 456 aaPredicted RBP15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 UBDO15205 165 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 MAP7D1Q3KQU3 841 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 PABPC1LQ4VXU2 614 aaKnown RBP15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 TMEM259Q4ZIN3 620 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 PCID2Q5JVF3 399 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 PPHLN1Q8NEY8 458 aaKnown RBP15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 ASB9Q96DX5 294 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 ZNF512Q96ME7 567 aaPredicted RBP15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 PCDHGA7Q9Y5G6 932 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 SLC22A2O15244 555 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 GPR32O75388 356 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 DARSP14868 501 aaKnown RBP15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 ADSLP30566 484 aaPredicted RBP15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 CHRNA4P43681 627 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 HK2P52789 917 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 STX5Q13190 355 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 SEMA3BQ13214 749 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 HERC3Q15034 1050 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 TWF2Q6IBS0 349 aaKnown RBP15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 LCA5Q86VQ0 697 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 HERC6Q8IVU3 1022 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 ARRDC4Q8NCT1 418 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 DDI1Q8WTU0 396 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 EXT2Q93063 718 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 TMIGD2Q96BF3 282 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 SLC9A7Q96T83 725 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 TMCO1Q9UM00 188 aa15.32■□□□□ 0.04
SEMA3B-203ENST00000419007 HEATR9A2RTY3 570 aa15.31■□□□□ 0.04
SEMA3B-203ENST00000419007 TARM1B6A8C7 271 aa15.31■□□□□ 0.04
SEMA3B-203ENST00000419007 CXCL11O14625 94 aa15.31■□□□□ 0.04
SEMA3B-203ENST00000419007 ZNF26P17031 533 aaPredicted RBP15.31■□□□□ 0.04
SEMA3B-203ENST00000419007 CKMT2P17540 419 aa15.31■□□□□ 0.04
SEMA3B-203ENST00000419007 KCNA5P22460 613 aa15.31■□□□□ 0.04
SEMA3B-203ENST00000419007 NOMO2Q5JPE7 1267 aa15.31■□□□□ 0.04
SEMA3B-203ENST00000419007 RBM20Q5T481 1227 aaKnown RBP15.31■□□□□ 0.04
SEMA3B-203ENST00000419007 PIWIL4Q7Z3Z4 852 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms