RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 KLF11O14901 512 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 TSPAN3O60637 253 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 TBL1XO60907 577 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 ARCN1P48444 511 aaKnown RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 SERPINB8P50452 374 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 CYP4F8P98187 520 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 MSLNQ13421 630 aaPredicted RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 INO80DQ53TQ3 878 aaPredicted RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 PLPP4Q5VZY2 271 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 RNF219Q5W0B1 726 aaPredicted RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 PDE12Q6L8Q7 609 aaKnown RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 KIAA0408Q6ZU52 694 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 SPATA21Q7Z572 469 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 RAB3IL1Q8TBN0 382 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 ZNF778Q96MU6 729 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 SLC13A1Q9BZW2 595 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 MANSC1Q9H8J5 431 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 IARS2Q9NSE4 1012 aaKnown RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 PCMTD2Q9NV79 361 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 ZMYM5Q9UJ78 669 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 RIMKLBQ9ULI2 386 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 LCHNA4D1U4 455 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 TPP1O14773 563 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 BIRC5O15392 142 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 EDF1O60869 148 aaKnown RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 MPOP05164 745 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 GSTA1P08263 222 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 TYK2P29597 1187 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 CHRNA4P43681 627 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 SERPINB4P48594 390 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 RALGPS1Q5JS13 557 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 TSTD2Q5T7W7 516 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 FSTL4Q6MZW2 842 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 ESRP1Q6NXG1 681 aaKnown RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 LCA5Q86VQ0 697 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 LMNTD2Q8IXW0 634 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 HS6ST3Q8IZP7 471 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 SLC25A41Q8N5S1 370 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 SPOCK2Q92563 424 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 AGAP2Q99490 1192 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 CORO1BQ9BR76 489 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 RHOJQ9H4E5 214 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 IL1RAPL1Q9NZN1 696 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 SLC17A6Q9P2U8 582 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 DPP7Q9UHL4 492 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 PHTF1Q9UMS5 762 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 ARHGAP26Q9UNA1 814 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 MIA3Q5JRA6 1907 aa16.97■□□□□ 0.31
SSBP3-205ENST00000417664 MTCL1Q9Y4B5 1905 aaKnown RBP16.97■□□□□ 0.31
SSBP3-205ENST00000417664 CXorf51AA0A1B0GTR3 108 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 MROH6A6NGR9 719 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 HIDE1A8MVS5 230 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 CBX4O00257 560 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 MUSKO15146 869 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 INSIG1O15503 277 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 VAPBO95292 243 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 IL1BP01584 269 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 HNRNPA1P09651 372 aaKnown RBP eCLIP16.96■□□□□ 0.31
SSBP3-205ENST00000417664 ATXN1LP0C7T5 689 aaKnown RBP16.96■□□□□ 0.31
SSBP3-205ENST00000417664 CR2P20023 1033 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 DNAJB1P25685 340 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 ZXDBP98169 803 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 NSUN2Q08J23 767 aaKnown RBP eCLIP16.96■□□□□ 0.31
SSBP3-205ENST00000417664 CDH18Q13634 790 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 THOC5Q13769 683 aaKnown RBP16.96■□□□□ 0.31
SSBP3-205ENST00000417664 CNGA3Q16281 694 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 MPPE1Q53F39 396 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 SIRPB2Q5JXA9 342 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 CDHR3Q6ZTQ4 885 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 KDELC2Q7Z4H8 507 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 GALNT7Q86SF2 657 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 DCLK2Q8N568 766 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 LBHD1Q9BQE6 289 aaPredicted RBP16.96■□□□□ 0.31
SSBP3-205ENST00000417664 ARL2BPQ9Y2Y0 163 aa16.96■□□□□ 0.31
SSBP3-205ENST00000417664 A0A1W2PRU2 124 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 NDST3O95803 873 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 MYL4P12829 197 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 PTPN2P17706 415 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 IFT88Q13099 833 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 PDE1CQ14123 709 aaPredicted RBP16.95■□□□□ 0.3
SSBP3-205ENST00000417664 SEPT6Q14141 434 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 IHHQ14623 411 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 ZKSCAN8Q15776 578 aaPredicted RBP16.95■□□□□ 0.3
SSBP3-205ENST00000417664 ARHGAP15Q53QZ3 475 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 METTL3Q86U44 580 aaKnown RBP16.95■□□□□ 0.3
SSBP3-205ENST00000417664 CARNMT1Q8N4J0 409 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 DCAF4L2Q8NA75 395 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 TDRD5Q8NAT2 981 aaKnown RBP16.95■□□□□ 0.3
SSBP3-205ENST00000417664 PTPRN2Q92932 1015 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 VPS39Q96JC1 886 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 SAMD11Q96NU1 681 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 NUDCD1Q96RS6 583 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 GPR22Q99680 433 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 FEM1AQ9BSK4 669 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 HTATIP2Q9BUP3 242 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 SNX15Q9NRS6 342 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 CFAP97Q9P2B7 532 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 OR51B4Q9Y5P0 310 aa16.95■□□□□ 0.3
SSBP3-205ENST00000417664 E2F8A0AVK6 867 aa16.94■□□□□ 0.3
SSBP3-205ENST00000417664 CCL16O15467 120 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms