RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 U3KQV3 271 aa13.02□□□□□ -0.32
SCN1B-202ENST00000415950 SERPINF2P08697 491 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 ODC1P11926 461 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 TFEBP19484 476 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 HK2P52789 917 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 JAG1P78504 1218 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 PANX3Q96QZ0 392 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 AGAP2Q99490 1192 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 C9orf16Q9BUW7 83 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 NUAK2Q9H093 628 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 TKTL2Q9H0I9 626 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 XPNPEP1Q9NQW7 623 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 PDGFCQ9NRA1 345 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 DDX43Q9NXZ2 648 aaKnown RBP13.02□□□□□ -0.33
SCN1B-202ENST00000415950 PIK3C2AO00443 1686 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 CCNB1P14635 433 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 TUBP50607 506 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 ACTR3P61158 418 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 SPIDRQ14159 915 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 CA9Q16790 459 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 HSDL1Q3SXM5 330 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 TRIQKQ629K1 86 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 TIGD7Q6NT04 549 aaPredicted RBP13.02□□□□□ -0.33
SCN1B-202ENST00000415950 C11orf88Q6PI97 169 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 C1orf50Q9BV19 199 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 GATA5Q9BWX5 397 aaPredicted RBP13.02□□□□□ -0.33
SCN1B-202ENST00000415950 KLHL3Q9UH77 587 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 RPL26L1Q9UNX3 145 aaKnown RBP13.02□□□□□ -0.33
SCN1B-202ENST00000415950 MYH7P12883 1935 aa13.02□□□□□ -0.33
SCN1B-202ENST00000415950 MAGEC1O60732 1142 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CRTAMO95727 393 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 POMCP01189 267 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ZNF37AP17032 561 aaPredicted RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ABL2P42684 1182 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 BOP1Q14137 746 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 KLHL17Q6TDP4 642 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 SPESP1Q6UW49 350 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 PHTF2Q8N3S3 785 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 MTFMTQ96DP5 389 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 DEPDC7Q96QD5 511 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ATAD3AQ9NVI7 634 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 VTI1BQ9UEU0 232 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 LRRC42Q9Y546 428 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 COL1A1P02452 1464 aaPredicted RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 MYO9BQ13459 2157 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CCL15-CCL14A0A0B4J2E2 113 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CCDC189A1A4V9 331 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 NEMP2A6NFY4 417 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 MOXD2PA6NHM9 499 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 SLC25A27O95847 323 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 KRT6AP02538 564 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 KRT6BP04259 564 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 KRT6CP48668 564 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 TRAF3Q13114 568 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CCL15Q16663 113 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ZSWIM7Q19AV6 140 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 SCARA3Q6AZY7 606 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CDHR3Q6ZTQ4 885 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 EPHX4Q8IUS5 362 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 LPGAT1Q92604 370 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 SCUBE2Q9NQ36 999 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ATP6V1HQ9UI12 483 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CLUHO75153 1309 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 A0A1B0GVG6 124 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 GAS2O43903 313 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 NRP2O60462 931 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 PLIN3O60664 434 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CAPN1P07384 714 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 FRG1Q14331 258 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 SNX17Q15036 470 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 TATDN1Q6P1N9 297 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ARHGAP36Q6ZRI8 547 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CAMK1DQ8IU85 385 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ENKURQ8TC29 256 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 MIPEPQ99797 713 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 GOLGA2P5Q9HBQ8 144 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 MIEF1Q9NQG6 463 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 KLHL1Q9NR64 748 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 DGKBQ9Y6T7 804 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 DBTP11182 482 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 FMO4P31512 558 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ST13P50502 369 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 SRP54P61011 504 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 NRG1Q02297 640 aaPredicted RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 CAMK2GQ13555 558 aaPredicted RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 NR1D2Q14995 579 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 PMF1Q6P1K2 205 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 PSTKQ8IV42 348 aaKnown RBP13.01□□□□□ -0.33
SCN1B-202ENST00000415950 HERC6Q8IVU3 1022 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 RSPH1Q8WYR4 309 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 LRTOMTQ8WZ04 291 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 MCRS1Q96EZ8 462 aa13.01□□□□□ -0.33
SCN1B-202ENST00000415950 ACO2Q99798 780 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms