RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ZNF212Q9UDV6 495 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 CDC23Q9UJX2 597 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 INTUQ9ULD6 942 aa20.83■□□□□ 0.92
PTPRU-203ENST00000415600 ZMPSTE24O75844 475 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 DKK1O94907 266 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 ITGB7P26010 798 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 RFC1P35251 1148 aaPredicted RBP20.82■□□□□ 0.92
PTPRU-203ENST00000415600 PRAMEF14Q5SWL7 426 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 MANEALQ5VSG8 457 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 KIAA1161Q6NSJ0 714 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 ZNF354CQ86Y25 554 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 GATAD2AQ86YP4 633 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 RYBPQ8N488 228 aaPredicted RBP20.82■□□□□ 0.92
PTPRU-203ENST00000415600 CHST14Q8NCH0 376 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 JOSD2Q8TAC2 188 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 CNDP2Q96KP4 475 aaKnown RBP20.82■□□□□ 0.92
PTPRU-203ENST00000415600 ALS2CR12Q96Q35 445 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 PCDHB18PQ96TA0 734 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 EPAS1Q99814 870 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 CCDC86Q9H6F5 360 aaKnown RBP20.82■□□□□ 0.92
PTPRU-203ENST00000415600 TOR4AQ9NXH8 423 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 CAPN6Q9Y6Q1 641 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 TMEM131Q92545 1883 aa20.82■□□□□ 0.92
PTPRU-203ENST00000415600 ENC1O14682 589 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 WNT9AO14904 365 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 SLC31A1O15431 190 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 LRIG2O94898 1065 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 HNRNPA2B1P22626 353 aaKnown RBP20.81■□□□□ 0.92
PTPRU-203ENST00000415600 GLDCP23378 1020 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 ZNF143P52747 638 aaPredicted RBP20.81■□□□□ 0.92
PTPRU-203ENST00000415600 HDAC4P56524 1084 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 SNRPD1P62314 119 aaKnown RBP20.81■□□□□ 0.92
PTPRU-203ENST00000415600 RPS21P63220 83 aaKnown RBP20.81■□□□□ 0.92
PTPRU-203ENST00000415600 SCAPQ12770 1279 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 PTP4A2Q12974 167 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 ARRDC3Q96B67 414 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 ARHGEF26Q96DR7 871 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 FEM1CQ96JP0 617 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 PACSIN1Q9BY11 444 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 HECAQ9UBI9 543 aaPredicted RBP20.81■□□□□ 0.92
PTPRU-203ENST00000415600 SALL4Q9UJQ4 1053 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 DOCK4Q8N1I0 1966 aa20.81■□□□□ 0.92
PTPRU-203ENST00000415600 TNFAIP3P21580 790 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 L1CAMP32004 1257 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 HNF1BP35680 557 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 CCNHP51946 323 aaPredicted RBP20.8■□□□□ 0.92
PTPRU-203ENST00000415600 TAS2R38P59533 333 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 ARF5P84085 180 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 RAD51Q06609 339 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 PAPD7Q5XG87 772 aaKnown RBP20.8■□□□□ 0.92
PTPRU-203ENST00000415600 SCYL2Q6P3W7 929 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 MON1BQ7L1V2 547 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 CASKIN2Q8WXE0 1202 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 RAB7BQ96AH8 199 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 CNPY3Q9BT09 278 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 OSBPL1AQ9BXW6 950 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 CATSPERBQ9H7T0 1116 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 SRRM3A6NNA2 597 aaPredicted RBP20.8■□□□□ 0.92
PTPRU-203ENST00000415600 H2AFZP0C0S5 128 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 THEGLP0DJG4 465 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 ADRB3P13945 408 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 EPHB2P29323 1055 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 H2AFVQ71UI9 128 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 NLRP14Q86W24 1093 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 TMPRSS12Q86WS5 348 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 DCP2Q8IU60 420 aaKnown RBP20.8■□□□□ 0.92
PTPRU-203ENST00000415600 EID2Q8N6I1 236 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 CCDC185Q8N715 623 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 TMEM145Q8NBT3 493 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 ARHGEF2Q92974 986 aaKnown RBP20.8■□□□□ 0.92
PTPRU-203ENST00000415600 VCPIP1Q96JH7 1222 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 MCEEQ96PE7 176 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 CARD6Q9BX69 1037 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 ZDHHC6Q9H6R6 413 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 FCF1Q9Y324 198 aaKnown RBP20.8■□□□□ 0.92
PTPRU-203ENST00000415600 WASF2Q9Y6W5 498 aa20.8■□□□□ 0.92
PTPRU-203ENST00000415600 FAM208BQ5VWN6 2430 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 NEMP1O14524 444 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 AP1G1O43747 822 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 GSRP00390 522 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 ATP1A1P05023 1023 aaKnown RBP20.79■□□□□ 0.92
PTPRU-203ENST00000415600 PRLRP16471 622 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 HTR7P34969 479 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 ILKQ13418 452 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 SHBQ15464 509 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 SMAD1Q15797 465 aaKnown RBP20.79■□□□□ 0.92
PTPRU-203ENST00000415600 ZNF284Q2VY69 593 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 ACAD10Q6JQN1 1059 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 SPATS2Q86XZ4 545 aaKnown RBP20.79■□□□□ 0.92
PTPRU-203ENST00000415600 MNS1Q8NEH6 495 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 TM6SF2Q9BZW4 377 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 JRKLQ9Y4A0 524 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 ASPMQ8IZT6 3477 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 AKAP13Q12802 2813 aa20.79■□□□□ 0.92
PTPRU-203ENST00000415600 A0A0A6YYK5 440 aaPredicted RBP20.78■□□□□ 0.92
PTPRU-203ENST00000415600 FGF10O15520 208 aaPredicted RBP20.78■□□□□ 0.92
PTPRU-203ENST00000415600 TSPAN6O43657 245 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 ZNF821O75541 412 aaPredicted RBP20.78■□□□□ 0.92
PTPRU-203ENST00000415600 RFPL3O75679 317 aa20.78■□□□□ 0.92
PTPRU-203ENST00000415600 GJB6O95452 261 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms