RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ZNF606Q8WXB4 792 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 OVCA2Q8WZ82 227 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 FAM3CQ92520 227 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 CHFRQ96EP1 664 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 PIWIL1Q96J94 861 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 C16orf92Q96LL3 132 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 CEP295NLQ96MC4 621 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SARGQ9BW04 601 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 NAA15Q9BXJ9 866 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 GANQ9H2C0 597 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 PDCL3Q9H2J4 239 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ECT2Q9H8V3 914 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 CARS2Q9HA77 564 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 FBRSL1Q9HCM7 1045 aaKnown RBP5.08□□□□□ -1.6
VPS41-205ENST00000414632 ZDHHC4Q9NPG8 344 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS41-205ENST00000414632 COMMD8Q9NX08 183 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 DNAJC28Q9NX36 388 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 IMPACTQ9P2X3 320 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 KIAA1257Q9ULG3 409 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 ARHGAP26Q9UNA1 814 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 CNTN6Q9UQ52 1028 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SH3BP1Q9Y3L3 701 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SIT1Q9Y3P8 196 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 USP34Q70CQ2 3546 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 CACNA1IQ9P0X4 2223 aa5.08□□□□□ -1.6
VPS41-205ENST00000414632 SYNJ2BP-COX16A0A087WUM0 186 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 PRR19A6NJB7 356 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 SMTNL1A8MU46 457 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 LGALS16A8MUM7 142 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 E5RJQ4 531 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 F8VZ95 297 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 TRDMT1O14717 391 aaKnown RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 HGSO14964 777 aaPredicted RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 TRIM24O15164 1050 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 MED7O43513 233 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 BUB1BO60566 1050 aaPredicted RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 GRAP2O75791 330 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 EGFP01133 1207 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 MMEP08473 750 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 ZGLP1P0C6A0 271 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 MSL3P1P0C860 447 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 RALAP11233 206 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 CYP11B1P15538 503 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 PTMSP20962 102 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 ATP5C1P36542 298 aaKnown RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 CD96P40200 585 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 GPD2P43304 727 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 SLC6A11P48066 632 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 PDE6CP51160 858 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 CLCN5P51795 746 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 MVKQ03426 396 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 MESP2Q0VG99 397 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 TCF15Q12870 199 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 PDCLQ13371 301 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 FZD5Q13467 585 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 GBX1Q14549 363 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 PDGFRLQ15198 375 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 TAF5Q15542 800 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 ANO4Q32M45 955 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 HSF5Q4G112 596 aaPredicted RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 CATSPEREQ5SY80 951 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 SNX30Q5VWJ9 437 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 BSPRYQ5W0U4 402 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 TSSK4Q6SA08 328 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 ZNF852Q6ZMS4 543 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 Q6ZS52 159 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 TPGS1Q6ZTW0 290 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 FAM183BPQ6ZVS7 135 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 PHLDB2Q86SQ0 1253 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 SFTPA1Q8IWL2 248 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 FAM71AQ8IYT1 594 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 WDTC1Q8N5D0 677 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 NEK11Q8NG66 645 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 SLC35G2Q8TBE7 412 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 ATP2A3Q93084 1043 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 FAM149B1Q96BN6 582 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 ERLEC1Q96DZ1 483 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 NAP1L5Q96NT1 182 aaPredicted RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 CPXM1Q96SM3 734 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 BPIFA3Q9BQP9 254 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 DDX23Q9BUQ8 820 aaKnown RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 SMOC1Q9H4F8 434 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 FAM124BQ9H5Z6 455 aaPredicted RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 LMAN1LQ9HAT1 526 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 PNPLA8Q9NP80 782 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 RIC8BQ9NVN3 520 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 POLR3BQ9NW08 1133 aaPredicted RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 SPATA6Q9NWH7 488 aaPredicted RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 C2orf42Q9NWW7 574 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 PLK2Q9NYY3 685 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 COX16Q9P0S2 106 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 SLAMF8Q9P0V8 285 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 DLGAP2Q9P1A6 1054 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 LSM7Q9UK45 103 aaKnown RBP5.07□□□□□ -1.6
VPS41-205ENST00000414632 NAALADL1Q9UQQ1 740 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 SIK3Q9Y2K2 1263 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 CEP192Q8TEP8 1941 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 F5P12259 2224 aa5.07□□□□□ -1.6
VPS41-205ENST00000414632 A0A1W2PQJ5 194 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms