RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SAE1Q9UBE0 346 aaPredicted RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 DKK3Q9UBP4 350 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 SERGEFQ9UGK8 458 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 TPX2Q9ULW0 747 aaKnown RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 PYCARDQ9ULZ3 195 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.68■□□□□ 0.26
LINC00398-201ENST00000414407 KIF5CO60282 957 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 ZNF189O75820 626 aaPredicted RBP16.68■□□□□ 0.26
LINC00398-201ENST00000414407 ACSL1P33121 698 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 SCNN1BP51168 640 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 METAP1P53582 386 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 CNTN1Q12860 1018 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 KLF1Q13351 362 aaPredicted RBP16.68■□□□□ 0.26
LINC00398-201ENST00000414407 AGBL4Q5VU57 503 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 FAM124AQ86V42 546 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 POLR1EQ9GZS1 481 aaKnown RBP16.68■□□□□ 0.26
LINC00398-201ENST00000414407 ATP13A3Q9H7F0 1226 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 ATP8A1Q9Y2Q0 1164 aa16.68■□□□□ 0.26
LINC00398-201ENST00000414407 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.68■□□□□ 0.26
LINC00398-201ENST00000414407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 LRRC72A6NJI9 287 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 C10orf142B7Z368 130 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 RNF103O00237 685 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 INSIG1O15503 277 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 PLRG1O43660 514 aaKnown RBP16.67■□□□□ 0.26
LINC00398-201ENST00000414407 NEBLO76041 1014 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 SEMA4FO95754 770 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 UGT2B4P06133 528 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 SERPINA4P29622 427 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 GKP32189 559 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 DPP6P42658 865 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 SUOXP51687 545 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 NEK3P51956 506 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 ADPRHP54922 357 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 BCL2L1Q07817 233 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 SLC45A4Q5BKX6 768 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 PIP5KL1Q5T9C9 394 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 NCEH1Q6PIU2 408 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 BRAT1Q6PJG6 821 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.67■□□□□ 0.26
LINC00398-201ENST00000414407 TMEFF1Q8IYR6 380 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 OR2T34Q8NGX1 318 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 ACTL9Q8TC94 416 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 SPOCK2Q92563 424 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 RAB7BQ96AH8 199 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 KLHL32Q96NJ5 620 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 QKIQ96PU8 341 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC00398-201ENST00000414407 VAT1Q99536 393 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 GPR174Q9BXC1 333 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 SUV39H2Q9H5I1 410 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 NT5MQ9NPB1 228 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 PCDHGA5Q9Y5G8 931 aa16.67■□□□□ 0.26
LINC00398-201ENST00000414407 A0A1W2PQ67 120 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 TSPAN11A1L157 253 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 C16orf96A6NNT2 1141 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 METTL12A8MUP2 240 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 KCNK1O00180 336 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 KCNK3O14649 394 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 AP1G1O43747 822 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 SOCS5O75159 536 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 JCHAINP01591 159 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 RETP07949 1114 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 ADRB3P13945 408 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 OTUD4Q01804 1114 aaKnown RBP16.66■□□□□ 0.26
LINC00398-201ENST00000414407 POM121L1PQ3SYA9 428 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 ZNF569Q5MCW4 686 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 NEK5Q6P3R8 708 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 FBXL19Q6PCT2 694 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 PARS2Q7L3T8 475 aaKnown RBP16.66■□□□□ 0.26
LINC00398-201ENST00000414407 ZC3H18Q86VM9 953 aaKnown RBP16.66■□□□□ 0.26
LINC00398-201ENST00000414407 SLC13A5Q86YT5 568 aaPredicted RBP16.66■□□□□ 0.26
LINC00398-201ENST00000414407 OR14C36Q8NHC7 312 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 LRRN4Q8WUT4 740 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 HAUS1Q96CS2 278 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 PHOX2BQ99453 314 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 FERMT1Q9BQL6 677 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 FRMD8P1Q9BZ68 369 aaPredicted RBP16.66■□□□□ 0.26
LINC00398-201ENST00000414407 NOD2Q9HC29 1040 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 PREBQ9HCU5 417 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 SCUBE2Q9NQ36 999 aa16.66■□□□□ 0.26
LINC00398-201ENST00000414407 PLK4O00444 970 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 TRAFD1O14545 582 aaPredicted RBP16.65■□□□□ 0.26
LINC00398-201ENST00000414407 EPN2O95208 641 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 PIGNO95427 931 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 HOXD12P35452 270 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 TAS2R38P59533 333 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 ZBTB17Q13105 803 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 TEX44Q53QW1 395 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 SYCP2LQ5T4T6 812 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 CAMK1DQ8IU85 385 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 SLC41A1Q8IVJ1 513 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 CDKL3Q8IVW4 592 aaPredicted RBP16.65■□□□□ 0.26
LINC00398-201ENST00000414407 SLC35F6Q8N357 371 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 CNTD1Q8N815 330 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 HTR3CQ8WXA8 447 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 ECHDC3Q96DC8 303 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 SEMA3CQ99985 751 aa16.65■□□□□ 0.26
LINC00398-201ENST00000414407 GMEB2Q9UKD1 530 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms