RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 FNDC3AQ9Y2H6 1198 aaKnown RBP19.11■□□□□ 0.65
TRIM56-202ENST00000412507 UPK3BL1B0FP48 263 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 UPK3BL2E5RIL1 263 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 SLC31A1O15431 190 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 IL4RP24394 825 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 NUDT1P36639 197 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 ABL2P42684 1182 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 CTSKP43235 329 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 IL10RBQ08334 325 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 SLC14A1Q13336 389 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 N4BP2L1Q5TBK1 243 aaPredicted RBP19.1■□□□□ 0.65
TRIM56-202ENST00000412507 HORMAD1Q86X24 394 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 FAM71BQ8TC56 605 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 MYOCQ99972 504 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 OSBPL1AQ9BXW6 950 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 SLC32A1Q9H598 525 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 TM7SF3Q9NS93 570 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 IPO11Q9UI26 975 aaKnown RBP19.1■□□□□ 0.65
TRIM56-202ENST00000412507 LCMT1Q9UIC8 334 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 DMTF1Q9Y222 760 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 CA5BQ9Y2D0 317 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 FADS3Q9Y5Q0 445 aa19.1■□□□□ 0.65
TRIM56-202ENST00000412507 PALMO75781 387 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 ADRB1P08588 477 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 CEACAM1P13688 526 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 PRLRP16471 622 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 ARSEP51690 589 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 DPYSL3Q14195 570 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 ZNF284Q2VY69 593 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 SLC45A4Q5BKX6 768 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 SEL1L3Q68CR1 1132 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 RHOT2Q8IXI1 618 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 TSEN2Q8NCE0 465 aaKnown RBP19.09■□□□□ 0.65
TRIM56-202ENST00000412507 SKA1Q96BD8 255 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 CPEB1Q9BZB8 566 aaKnown RBP19.09■□□□□ 0.65
TRIM56-202ENST00000412507 KLHL11Q9NVR0 708 aa19.09■□□□□ 0.65
TRIM56-202ENST00000412507 RCOR3Q9P2K3 495 aaPredicted RBP19.09■□□□□ 0.65
TRIM56-202ENST00000412507 ARID1BQ8NFD5 2236 aaPredicted RBP19.09■□□□□ 0.65
TRIM56-202ENST00000412507 PRAMEF26H0Y7S4 382 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 H0Y8X5 98 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 AP1G1O43747 822 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 SH3BP5O60239 455 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 PIGNO95427 931 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 ZNF883P0CG24 379 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 MAN1A1P33908 653 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 RGRP47804 291 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 ZNF423Q2M1K9 1284 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 TMEM259Q4ZIN3 620 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 LRRC73Q5JTD7 316 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 PRAMEF14Q5SWL7 426 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 MFSD2AQ8NA29 543 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 KCTD6Q8NC69 237 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 RFFLQ8WZ73 363 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 RAB7BQ96AH8 199 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 FEM1CQ96JP0 617 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 CAMK1GQ96NX5 476 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 CINPQ9BW66 212 aaPredicted RBP19.08■□□□□ 0.64
TRIM56-202ENST00000412507 CALN1Q9BXU9 219 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 FZD3Q9NPG1 666 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 GGT7Q9UJ14 662 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 ITM2BQ9Y287 266 aa19.08■□□□□ 0.64
TRIM56-202ENST00000412507 TLR4O00206 839 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 MTA2O94776 668 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 KRT7P08729 469 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 SERPINB6P35237 376 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 ARHGAP25P42331 645 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 STAT4Q14765 748 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 KIAA1161Q6NSJ0 714 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 SRLQ86TD4 932 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 TTC7BQ86TV6 843 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 NAXDQ8IW45 347 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 PCDH19Q8TAB3 1148 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 INTUQ9ULD6 942 aa19.07■□□□□ 0.64
TRIM56-202ENST00000412507 NEMP1O14524 444 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 SPINT1O43278 529 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 TSPAN6O43657 245 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 BUB1BO60566 1050 aaPredicted RBP19.06■□□□□ 0.64
TRIM56-202ENST00000412507 ITIH2P19823 946 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 MAGEA1P43355 309 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 NXPH1P58417 271 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 RPS21P63220 83 aaKnown RBP19.06■□□□□ 0.64
TRIM56-202ENST00000412507 FAM193AP78312 1265 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 IL9RQ01113 521 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 SLC10A7Q0GE19 358 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 RFTN1Q14699 578 aaPredicted RBP19.06■□□□□ 0.64
TRIM56-202ENST00000412507 LBRQ14739 615 aaKnown RBP19.06■□□□□ 0.64
TRIM56-202ENST00000412507 PDK2Q15119 407 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 ANKRD20A8PQ5CZ79 823 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 ZFYVE27Q5T4F4 411 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 ATPAF2Q8N5M1 289 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 SETD7Q8WTS6 366 aaKnown RBP19.06■□□□□ 0.64
TRIM56-202ENST00000412507 SLC17A9Q9BYT1 436 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 SUV39H2Q9H5I1 410 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 DKK3Q9UBP4 350 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 PTPRBP23467 1997 aa19.06■□□□□ 0.64
TRIM56-202ENST00000412507 SPAARA0A1B0GVQ0 90 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 MUSKO15146 869 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 MFSD11O43934 449 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 MAFKO60675 156 aa19.05■□□□□ 0.64
TRIM56-202ENST00000412507 PAK4O96013 591 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms