RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 HMGB4Q8WW32 186 aa14.54□□□□□ -0.08
LIMS2-209ENST00000410038 ATOH1Q92858 354 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-209ENST00000410038 RTP4Q96DX8 246 aa14.54□□□□□ -0.08
LIMS2-209ENST00000410038 SEMA3CQ99985 751 aa14.54□□□□□ -0.08
LIMS2-209ENST00000410038 CPEB1Q9BZB8 566 aaKnown RBP14.54□□□□□ -0.08
LIMS2-209ENST00000410038 GLOD4Q9HC38 313 aa14.54□□□□□ -0.08
LIMS2-209ENST00000410038 SCUBE2Q9NQ36 999 aa14.54□□□□□ -0.08
LIMS2-209ENST00000410038 PRMT8Q9NR22 394 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-209ENST00000410038 HAUS2Q9NVX0 235 aa14.54□□□□□ -0.08
LIMS2-209ENST00000410038 TRHDEQ9UKU6 1024 aa14.54□□□□□ -0.08
LIMS2-209ENST00000410038 NUMA1Q14980 2115 aa14.54□□□□□ -0.08
LIMS2-209ENST00000410038 RNASEH1O60930 286 aaKnown RBP14.53□□□□□ -0.08
LIMS2-209ENST00000410038 LEFTY1O75610 366 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 ALDH1A2O94788 518 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 STK10O94804 968 aaKnown RBP14.53□□□□□ -0.08
LIMS2-209ENST00000410038 APBB3O95704 486 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 IL1BP01584 269 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 PRNPP04156 253 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 COILP38432 576 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-209ENST00000410038 AP1S1P61966 158 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 RAD51Q06609 339 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 IHHQ14623 411 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 RALGPS1Q5JS13 557 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 ANKRD20A2Q5SQ80 823 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 ANKRD20A1Q5TYW2 823 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 ANKRD20A3Q5VUR7 823 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 ZNF776Q68DI1 518 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-209ENST00000410038 NCEH1Q6PIU2 408 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 CCDC137Q6PK04 289 aaKnown RBP14.53□□□□□ -0.08
LIMS2-209ENST00000410038 TSSK4Q6SA08 328 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 RASSF3Q86WH2 238 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 MAML2Q8IZL2 1156 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-209ENST00000410038 TMIEQ8NEW7 156 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 MDGA1Q8NFP4 955 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 PIP4K2CQ8TBX8 421 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 CCDC110Q8TBZ0 833 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 LRIG1Q96JA1 1093 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 SPATA13Q96N96 652 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 NOD2Q9HC29 1040 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 PLXND1Q9Y4D7 1925 aa14.53□□□□□ -0.08
LIMS2-209ENST00000410038 PROB1E7EW31 1015 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 GCATO75600 419 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 PIGNO95427 931 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 MMP2P08253 660 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 NFKB1P19838 968 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 CES1P23141 567 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 MAPK8P45983 427 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 PSMD8P48556 350 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 PXNP49023 591 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-209ENST00000410038 METAP1P53582 386 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 CST6Q15828 149 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 GLIS1Q8NBF1 620 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 ATL2Q8NHH9 583 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 PRCCQ92733 491 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-209ENST00000410038 SIPA1Q96FS4 1042 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 IMP4Q96G21 291 aaKnown RBP14.52□□□□□ -0.08
LIMS2-209ENST00000410038 DDX47Q9H0S4 455 aaKnown RBP14.52□□□□□ -0.08
LIMS2-209ENST00000410038 SLC25A51Q9H1U9 297 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 BCCIPQ9P287 314 aaKnown RBP eCLIP14.52□□□□□ -0.08
LIMS2-209ENST00000410038 MRFAP1Q9Y605 127 aa14.52□□□□□ -0.08
LIMS2-209ENST00000410038 VPS13AQ96RL7 3174 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 KPNA3O00505 521 aaPredicted RBP14.52□□□□□ -0.09
LIMS2-209ENST00000410038 GFRA3O60609 400 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 OPHN1O60890 802 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 IFNB1P01574 187 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 UGT2B4P06133 528 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 TDGF1P13385 188 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 SLC8A1P32418 973 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 FNTAP49354 379 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 GRM3Q14832 879 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 POM121L1PQ3SYA9 428 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 KIAA1324Q6UXG2 1013 aaKnown RBP14.52□□□□□ -0.09
LIMS2-209ENST00000410038 GDPD4Q6W3E5 623 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 PRUNE1Q86TP1 453 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 PRPF39Q86UA1 669 aaKnown RBP14.52□□□□□ -0.09
LIMS2-209ENST00000410038 CAMK1DQ8IU85 385 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 PGBD3Q8N328 593 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 SPATA4Q8NEY3 305 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 TUBGCP5Q96RT8 1024 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 OSBPL1AQ9BXW6 950 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 GBA3Q9H227 469 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 ATP13A3Q9H7F0 1226 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 EBF1Q9UH73 591 aa14.52□□□□□ -0.09
LIMS2-209ENST00000410038 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.51□□□□□ -0.09
LIMS2-209ENST00000410038 C1QTNF3-AMACRE9PGA6 284 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 F5H423 210 aaPredicted RBP14.51□□□□□ -0.09
LIMS2-209ENST00000410038 CCDC188H7C350 402 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 MID1O15344 667 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 ADH1BP00325 375 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 DNTTP04053 509 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 SERPINF2P08697 491 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 ETS1P14921 441 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 C5AR1P21730 350 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 SERPINA4P29622 427 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 HOXA6P31267 233 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 CD86P42081 329 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 SKOR1P84550 965 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 LMNB2Q03252 620 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 ZBTB16Q05516 673 aa14.51□□□□□ -0.09
LIMS2-209ENST00000410038 BCL2L1Q07817 233 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms