RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.88■□□□□ 0.93
C4orf48-202ENST00000409860 PIP4K2CQ8TBX8 421 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 CCDC110Q8TBZ0 833 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 GRK7Q8WTQ7 553 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 PRCCQ92733 491 aaPredicted RBP20.88■□□□□ 0.93
C4orf48-202ENST00000409860 SIPA1Q96FS4 1042 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 CPEB1Q9BZB8 566 aaKnown RBP20.88■□□□□ 0.93
C4orf48-202ENST00000409860 MKRN2Q9H000 416 aaKnown RBP20.88■□□□□ 0.93
C4orf48-202ENST00000409860 SLC25A51Q9H1U9 297 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 ATP13A3Q9H7F0 1226 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 NOD2Q9HC29 1040 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 PRMT8Q9NR22 394 aaPredicted RBP20.88■□□□□ 0.93
C4orf48-202ENST00000409860 FEZ2Q9UHY8 353 aaPredicted RBP20.88■□□□□ 0.93
C4orf48-202ENST00000409860 PPM1HQ9ULR3 514 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 MRFAP1Q9Y605 127 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 ZDBF2Q9HCK1 2354 aa20.88■□□□□ 0.93
C4orf48-202ENST00000409860 SHROOM3Q8TF72 1996 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 LEFTY1O75610 366 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 ADH1BP00325 375 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 DNTTP04053 509 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 CTSLP07711 333 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 GABRG2P18507 467 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 NDUFV2P19404 249 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 NFKB1P19838 968 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 SERPINA4P29622 427 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 GKP32189 559 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 NRLP54845 237 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 RPS14P62263 151 aaKnown RBP20.87■□□□□ 0.93
C4orf48-202ENST00000409860 ZBTB16Q05516 673 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 CST6Q15828 149 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 TTC31Q49AM3 519 aaPredicted RBP20.87■□□□□ 0.93
C4orf48-202ENST00000409860 ARSIQ5FYB1 569 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 TTC27Q6P3X3 843 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 KIAA1324Q6UXG2 1013 aaKnown RBP20.87■□□□□ 0.93
C4orf48-202ENST00000409860 CACUL1Q86Y37 369 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 ARRDC2Q8TBH0 407 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 PPP1R16AQ96I34 528 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 MRGPRX1Q96LB2 322 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 DDX47Q9H0S4 455 aaKnown RBP20.87■□□□□ 0.93
C4orf48-202ENST00000409860 GBA3Q9H227 469 aa20.87■□□□□ 0.93
C4orf48-202ENST00000409860 TTC24A2A3L6 582 aaPredicted RBP20.86■□□□□ 0.93
C4orf48-202ENST00000409860 KPNA3O00505 521 aaPredicted RBP20.86■□□□□ 0.93
C4orf48-202ENST00000409860 GJB3O75712 270 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 GAS8O95995 478 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 UGT2B4P06133 528 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 SERPINF2P08697 491 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 ACADMP11310 421 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 CD68P34810 354 aaPredicted RBP20.86■□□□□ 0.93
C4orf48-202ENST00000409860 CD86P42081 329 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 BCL2L1Q07817 233 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 NIPAL4Q0D2K0 466 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 SFSWAPQ12872 951 aaKnown RBP20.86■□□□□ 0.93
C4orf48-202ENST00000409860 FAM182AQ5T1J6 154 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 CFAP58Q5T655 872 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 GDPD4Q6W3E5 623 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 ZNF572Q7Z3I7 529 aaPredicted RBP20.86■□□□□ 0.93
C4orf48-202ENST00000409860 KLHL7Q8IXQ5 586 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 SPATA4Q8NEY3 305 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 MDGA1Q8NFP4 955 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 IMP4Q96G21 291 aaKnown RBP20.86■□□□□ 0.93
C4orf48-202ENST00000409860 ZNF641Q96N77 438 aaPredicted RBP20.86■□□□□ 0.93
C4orf48-202ENST00000409860 PPP1R2P1Q96PQ5 205 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 FCRL5Q96RD9 977 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 DYRK4Q9NR20 520 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 SCML1Q9UN30 329 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 CKAP5Q14008 2032 aa20.86■□□□□ 0.93
C4orf48-202ENST00000409860 K7ESF4 209 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 PIGNO95427 931 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 ECEL1O95672 775 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 C5AR1P21730 350 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 CA4P22748 312 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 SLC8A1P32418 973 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 PRPSAP1Q14558 356 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 SLC14A2Q15849 920 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 RASSF3Q86WH2 238 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 PAF1Q8N7H5 531 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 MNS1Q8NEH6 495 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 SLC6A17Q9H1V8 727 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 PABPC3Q9H361 631 aaKnown RBP20.85■□□□□ 0.93
C4orf48-202ENST00000409860 PAK5Q9P286 719 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 EBF1Q9UH73 591 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 SARDHQ9UL12 918 aa20.85■□□□□ 0.93
C4orf48-202ENST00000409860 MUC3AQ02505 3323 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 MID1O15344 667 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 SOCS5O75159 536 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 C7P10643 843 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 PSMB4P28070 264 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 HOXA6P31267 233 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 NUBP1P53384 320 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 SKOR1P84550 965 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 PARP6Q2NL67 630 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 POM121L1PQ3SYA9 428 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 ZNF805Q5CZA5 627 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 C4orf22Q6V702 233 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 CAMK1DQ8IU85 385 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 KLHL32Q96NJ5 620 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 RBM15Q96T37 977 aaKnown RBP eCLIP20.84■□□□□ 0.93
C4orf48-202ENST00000409860 SUV39H2Q9H5I1 410 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 PCDH9Q9HC56 1237 aa20.84■□□□□ 0.93
C4orf48-202ENST00000409860 VPS45Q9NRW7 570 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms