RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 SLC1A5Q15758 541 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 RALGPS1Q5JS13 557 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SH2D5Q6ZV89 423 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 RBM23Q86U06 439 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 MFN1Q8IWA4 741 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 DDI1Q8WTU0 396 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SMG7Q92540 1137 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 NSMCE3Q96MG7 304 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 NUDCD1Q96RS6 583 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SEMA3CQ99985 751 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 APOL2Q9BQE5 337 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 MCMBPQ9BTE3 642 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CINPQ9BW66 212 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CAPS2Q9BXY5 557 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 TREX1Q9NSU2 369 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 TBC1D14Q9P2M4 693 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 VPS51Q9UID3 782 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ACTL7AQ9Y615 435 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 RPS6KL1Q9Y6S9 549 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 COL4A2P08572 1712 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 IQANK1A0A1B0GTG1 560 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CCDC85CA6NKD9 419 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 FOXO6A8MYZ6 492 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SIN3BO75182 1162 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 GLP2RO95838 553 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CREB1P16220 341 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CNTFP26441 200 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 RGRP47804 291 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 LMAN2Q12907 356 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ZNF697Q5TEC3 545 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CASC4Q6P4E1 433 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 PKN3Q6P5Z2 889 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 LEKR1Q6ZMV7 388 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 KIAA0907Q7Z7F0 614 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 UNC5BQ8IZJ1 945 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ITFG1Q8TB96 612 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ATXN2LQ8WWM7 1075 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ACDQ96AP0 544 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ZNF669Q96BR6 464 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SPON2Q9BUD6 331 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CCDC134Q9H6E4 229 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CHRAC1Q9NRG0 131 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 KIAA1522Q9P206 1035 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CLEC4EQ9ULY5 219 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 HMX2A2RU54 273 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CBX4O00257 560 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 INSIG1O15503 277 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 TYROBPO43914 113 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SNAP91O60641 907 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 GJB3O75712 270 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 PIAS1O75925 651 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 TMCC1O94876 653 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 PAPSS2O95340 614 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CYBBP04839 570 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 FGF1P05230 155 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 INHBAP08476 426 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SERPINF2P08697 491 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CHN1P15882 459 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 TPH1P17752 444 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 HLA-DPA1P20036 260 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ADRA1DP25100 572 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 NMBRP28336 390 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CCNFP41002 786 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CHRNA4P43681 627 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SERPINB9P50453 376 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ITKQ08881 620 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SIRPB2Q5JXA9 342 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 TIFABQ6ZNK6 161 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 METTL3Q86U44 580 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ARID3BQ8IVW6 561 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CNTN4Q8IWV2 1026 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SRRM1Q8IYB3 904 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 APCDD1Q8J025 514 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 PPM1NQ8N819 430 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ZNF557Q8N988 423 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 PPHLN1Q8NEY8 458 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CDKL2Q92772 493 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 MTBPQ96DY7 904 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 MFSD3Q96ES6 412 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 C2orf49Q9BVC5 232 aaPredicted RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 TRABDQ9H4I3 376 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SLC28A3Q9HAS3 691 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 SPHK2Q9NRA0 654 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 MKS1Q9NXB0 559 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 VPS28Q9UK41 221 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 INTS6Q9UL03 887 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 RIMKLBQ9ULI2 386 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 MRPS23Q9Y3D9 190 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 BPTFQ12830 3046 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 A0A1W2PPM1 405 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 TMEM120BA0PK00 339 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 TTC24A2A3L6 582 aaPredicted RBP5.57□□□□□ -1.52
EPHA4-202ENST00000409854 MROH6A6NGR9 719 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 ATP9BO43861 1147 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 UGT1A9O60656 530 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 BRAFP15056 766 aa5.57□□□□□ -1.52
EPHA4-202ENST00000409854 PSMA3P25788 255 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms