RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SLC41A1Q8IVJ1 513 aa20.34■□□□□ 0.85
USP39-204ENST00000409766 CFAP52Q8N1V2 620 aa20.34■□□□□ 0.85
USP39-204ENST00000409766 TMEM151AQ8N4L1 468 aa20.34■□□□□ 0.85
USP39-204ENST00000409766 PPP4R1Q8TF05 950 aa20.34■□□□□ 0.85
USP39-204ENST00000409766 CLSTN3Q9BQT9 956 aa20.34■□□□□ 0.85
USP39-204ENST00000409766 FAM167BQ9BTA0 163 aa20.34■□□□□ 0.85
USP39-204ENST00000409766 PDFQ9HBH1 243 aa20.34■□□□□ 0.85
USP39-204ENST00000409766 UXTQ9UBK9 157 aaPredicted RBP20.34■□□□□ 0.85
USP39-204ENST00000409766 COL4A6Q14031 1691 aa20.34■□□□□ 0.85
USP39-204ENST00000409766 LOC285095A0A1B0GVY8 99 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 GJB5O95377 273 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 SEC24AO95486 1093 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 APOA4P06727 396 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 HMGA1P17096 107 aaKnown RBP20.33■□□□□ 0.85
USP39-204ENST00000409766 ETFBP38117 255 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 PGGT1BP53609 377 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 SLC12A1Q13621 1099 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 TSTD2Q5T7W7 516 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 NEPROQ6NW34 567 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 KLHDC10Q6PID8 442 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 LONP2Q86WA8 852 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 MIPEPQ99797 713 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 STN1Q9H668 368 aaKnown RBP20.33■□□□□ 0.85
USP39-204ENST00000409766 AFF4Q9UHB7 1163 aaKnown RBP20.33■□□□□ 0.85
USP39-204ENST00000409766 FBXO5Q9UKT4 447 aa20.33■□□□□ 0.85
USP39-204ENST00000409766 FAM95CA0A1B0GW59 222 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.32■□□□□ 0.84
USP39-204ENST00000409766 PAPSS2O95340 614 aaPredicted RBP20.32■□□□□ 0.84
USP39-204ENST00000409766 COL6A2P12110 1019 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 CCL5P13501 91 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 DNAJB1P25685 340 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 RAB10P61026 200 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 TLE2Q04725 743 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 TMCO4Q5TGY1 634 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 KIAA1841Q6NSI8 718 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 NAPRTQ6XQN6 538 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 CEP97Q8IW35 865 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 ZNF461Q8TAF7 563 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 BTBD10Q9BSF8 475 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 TASP1Q9H6P5 420 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 PCDHB12Q9Y5F1 795 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 MROH6A6NGR9 719 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 COCHO43405 550 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 ABLIM3O94929 683 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 SBK3P0C264 359 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 ATXN1LP0C7T5 689 aaKnown RBP20.32■□□□□ 0.84
USP39-204ENST00000409766 AVPR1AP37288 418 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 TUBB3Q13509 450 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 IKBKEQ14164 716 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 SIRPB2Q5JXA9 342 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 HECTD3Q5T447 861 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 KIAA0408Q6ZU52 694 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 CENPLQ8N0S6 344 aaPredicted RBP20.32■□□□□ 0.84
USP39-204ENST00000409766 OR13J1Q8NGT2 312 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 RDH11Q8TC12 318 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 VWCEQ96DN2 955 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 RILPQ96NA2 401 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 SEMA3CQ99985 751 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 ACE2Q9BYF1 805 aaPredicted RBP20.32■□□□□ 0.84
USP39-204ENST00000409766 POLR1EQ9GZS1 481 aaKnown RBP20.32■□□□□ 0.84
USP39-204ENST00000409766 NACA2Q9H009 215 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 RETREG1Q9H6L5 497 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 PNPOQ9NVS9 261 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 OXSMQ9NWU1 459 aa20.32■□□□□ 0.84
USP39-204ENST00000409766 CPSF2Q9P2I0 782 aaKnown RBP20.32■□□□□ 0.84
USP39-204ENST00000409766 A0A0D9SEW6 157 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 MUSKO15146 869 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 TRIM13O60858 407 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 SERPINA6P08185 405 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 ALOX15P16050 662 aaPredicted RBP20.31■□□□□ 0.84
USP39-204ENST00000409766 CD151P48509 253 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 SLC11A2P49281 568 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 MNX1P50219 401 aaPredicted RBP20.31■□□□□ 0.84
USP39-204ENST00000409766 TRIM60Q495X7 471 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 MAVSQ7Z434 540 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 TREML1Q86YW5 311 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 ZNF599Q96NL3 588 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 TOX2Q96NM4 488 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 HSFX1Q9UBD0 423 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 MID2Q9UJV3 735 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 ACOT9Q9Y305 439 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 H3BNC9 293 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 TK2O00142 265 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 ZNF195O14628 629 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 GJB3O75712 270 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 ESRRAP11474 423 aaPredicted RBP20.31■□□□□ 0.84
USP39-204ENST00000409766 STMN1P16949 149 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 HOXD9P28356 352 aaPredicted RBP20.31■□□□□ 0.84
USP39-204ENST00000409766 FAM13CQ8NE31 585 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 KCTD4Q8WVF5 259 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 MYRFLQ96LU7 910 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 CADM1Q9BY67 442 aaKnown RBP20.31■□□□□ 0.84
USP39-204ENST00000409766 MAGEH1Q9H213 219 aa20.31■□□□□ 0.84
USP39-204ENST00000409766 RUVBL2Q9Y230 463 aaKnown RBP20.31■□□□□ 0.84
USP39-204ENST00000409766 ZFP37Q9Y6Q3 630 aaPredicted RBP20.31■□□□□ 0.84
USP39-204ENST00000409766 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.3■□□□□ 0.84
USP39-204ENST00000409766 TMEM114B3SHH9 223 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 AURKAO14965 403 aa20.3■□□□□ 0.84
USP39-204ENST00000409766 H2AFYO75367 372 aaKnown RBP20.3■□□□□ 0.84
USP39-204ENST00000409766 CRABP2P29373 138 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms