RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ACTR5Q9H9F9 607 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 CPNE5Q9HCH3 593 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 DLGAP2Q9P1A6 1054 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 PCDHGB4Q9UN71 923 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 SESN1Q9Y6P5 492 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 COL4A3Q01955 1670 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 MAGI3Q5TCQ9 1506 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 SYNJ2O15056 1496 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 TCOF1Q13428 1488 aaKnown RBP5□□□□□ -1.61
HMGB3P18-201ENST00000406327 UTYO14607 1347 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 NAIPQ13075 1403 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 UACAQ9BZF9 1416 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 TAF4O00268 1085 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 SCAMP1O15126 338 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 NDUFS3O75489 264 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 PLAUP00749 431 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 DNTTP04053 509 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 HEXAP06865 529 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 NR2F1P10589 423 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 SAT1P21673 171 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 EIF2DP41214 584 aaKnown RBP5□□□□□ -1.61
HMGB3P18-201ENST00000406327 PTPN9P43378 593 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 LMAN1P49257 510 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 GNAQP50148 359 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 CLCNKBP51801 687 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 CDH8P55286 799 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 ZBTB16Q05516 673 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 BECN1Q14457 450 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 PPP2R5BQ15173 497 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 TXNDC8Q6A555 127 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 TTI2Q6NXR4 508 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 CPLX2Q6PUV4 134 aaKnown RBP5□□□□□ -1.61
HMGB3P18-201ENST00000406327 TFAP2DQ7Z6R9 452 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 GPAT4Q86UL3 456 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 TMC8Q8IU68 726 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 VRK3Q8IV63 474 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 FAM185AQ8N0U4 392 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 WIPF2Q8TF74 440 aaPredicted RBP5□□□□□ -1.61
HMGB3P18-201ENST00000406327 SARAFQ96BY9 339 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 ASB2Q96Q27 587 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 BAG1Q99933 345 aaPredicted RBP5□□□□□ -1.61
HMGB3P18-201ENST00000406327 CENPOQ9BU64 300 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 TXLNGYQ9BZA5 131 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 ASAH2Q9NR71 780 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 NFKBIL1Q9UBC1 381 aaPredicted RBP5□□□□□ -1.61
HMGB3P18-201ENST00000406327 FBXO4Q9UKT5 387 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 INTS6Q9UL03 887 aaKnown RBP5□□□□□ -1.61
HMGB3P18-201ENST00000406327 CARD8Q9Y2G2 431 aa5□□□□□ -1.61
HMGB3P18-201ENST00000406327 SALL3Q9BXA9 1300 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 PBRM1Q86U86 1689 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 NUP160Q12769 1436 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 SETD1BQ9UPS6 1966 aaKnown RBP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 HECW1Q76N89 1606 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 A0A1W2PRQ8 180 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 RRHO14718 337 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 RNMTO43148 476 aaKnown RBP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 BEST1O76090 585 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 KRT10P13645 584 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 ST6GAL1P15907 406 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 TNFRSF1AP19438 455 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 CD72P21854 359 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 CDAP32320 146 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 GPR12P47775 334 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 OLIG2Q13516 323 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 FRG1Q14331 258 aaKnown RBP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 RNPS1Q15287 305 aaKnown RBP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 ALG10Q5BKT4 473 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 ALG10BQ5I7T1 473 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 NAA16Q6N069 864 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 CHST9Q7L1S5 443 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 OTULINQ96BN8 352 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 PERPQ96FX8 193 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 RITA1Q96K30 269 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 YME1L1Q96TA2 773 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 MXD3Q9BW11 206 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 HIPK3Q9H422 1215 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 SPATS2LQ9NUQ6 558 aaKnown RBP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 TLK1Q9UKI8 766 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 PACSIN3Q9UKS6 424 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 MKLN1Q9UL63 735 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 AAR2Q9Y312 384 aaKnown RBP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 CAPN7Q9Y6W3 813 aa4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 NUP153P49790 1475 aaKnown RBP4.99□□□□□ -1.61
HMGB3P18-201ENST00000406327 AOX1Q06278 1338 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 MST1RQ04912 1400 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 A0A096LPK6 155 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 FRMD3A2A2Y4 597 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 CXorf65A6NEN9 183 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 CDRT15L2A8MXV6 281 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 A8MZ25 164 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 SMIM22K7EJ46 135 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 EBAG9O00559 213 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 NARSO43776 548 aaKnown RBP4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 TMCC1O94876 653 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 CSPG5O95196 566 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 TFP02787 698 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 RARGP13631 454 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 TMEM11P17152 192 aa4.98□□□□□ -1.61
HMGB3P18-201ENST00000406327 IL11P20809 199 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms