RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SLC14A2Q15849 920 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 TECRLQ5HYJ1 363 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 SEL1L3Q68CR1 1132 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 OR13J1Q8NGT2 312 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 HEXDCQ8WVB3 486 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 IRGQQ8WZA9 623 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 CASP10Q92851 521 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 SPATA16Q9BXB7 569 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 GLOD4Q9HC38 313 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 PAPOLBQ9NRJ5 636 aaKnown RBP9.96□□□□□ -0.81
MSH2-202ENST00000406134 PCDHGA7Q9Y5G6 932 aa9.96□□□□□ -0.81
MSH2-202ENST00000406134 FAM95CA0A1B0GW59 222 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 C17orf102A2RUQ5 167 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 KCNC1P48547 511 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 XIAPP98170 497 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 CDKL1Q00532 357 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 SLC12A1Q13621 1099 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 PCID2Q5JVF3 399 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 FAM110BQ8TC76 370 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 ANKRD49Q8WVL7 239 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 SLCO4A1Q96BD0 722 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 TADA1Q96BN2 335 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 TSC22D3Q99576 134 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 SLC2A11Q9BYW1 496 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 NMUR1Q9HB89 426 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 POLR3BQ9NW08 1133 aaPredicted RBP9.96□□□□□ -0.82
MSH2-202ENST00000406134 PRPF19Q9UMS4 504 aaKnown RBP9.96□□□□□ -0.82
MSH2-202ENST00000406134 PSMD13Q9UNM6 376 aa9.96□□□□□ -0.82
MSH2-202ENST00000406134 AIM2O14862 343 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 SLC22A2O15244 555 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 MTSS1O43312 755 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 DENRO43583 198 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 GJB3O75712 270 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 VAPBO95292 243 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 DNAJB1P25685 340 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 PAPOLAP51003 745 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 HERC3Q15034 1050 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 PPP1R3AQ16821 1122 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 ITPRIPL1Q6GPH6 555 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 GDF6Q6KF10 455 aaPredicted RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 PQLC1Q8N2U9 271 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 MARVELD2Q8N4S9 558 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 RP9Q8TA86 221 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 DCUN1D1Q96GG9 259 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 HAPLN3Q96S86 360 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 SPON1Q9HCB6 807 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 IRAK4Q9NWZ3 460 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 SFMBT1Q9UHJ3 866 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 SARDHQ9UL12 918 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 ZNF106Q9H2Y7 1883 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 A0A1B0GTW7 788 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 MATN3O15232 486 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 SMIM24O75264 130 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 TADA2AO75478 443 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 HDCP19113 662 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 BRCC3P46736 316 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 ALDH1A3P47895 512 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 PKNOX1P55347 436 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 MRPS6P82932 125 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 USP10Q14694 798 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 RFTN1Q14699 578 aaPredicted RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 EML3Q32P44 896 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 LIN52Q52LA3 116 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 BTBD8Q5XKL5 378 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 NAPEPLDQ6IQ20 393 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 MRPL10Q7Z7H8 261 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 PGAM4Q8N0Y7 254 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 FAM156AQ8NDB6 213 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 SPPL2BQ8TCT7 592 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 NPAS2Q99743 824 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 EPAS1Q99814 870 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 CCDC28BQ9BUN5 200 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 FICDQ9BVA6 458 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 RBM38Q9H0Z9 239 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 VCXQ9H320 206 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 RRN3Q9NYV6 651 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 M0QZQ0 153 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 TRIM24O15164 1050 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 PAGE1O75459 146 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 OR6B1O95007 311 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 MYL3P08590 195 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 SRGAP2BP0DMP2 458 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 COL6A2P12110 1019 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 HADHAP40939 763 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 HK2P52789 917 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 DNAJB13P59910 316 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 RPL26P61254 145 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 MYBPC1Q00872 1141 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 PFKPQ01813 784 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 FOLH1Q04609 750 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 MAP2K5Q13163 448 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 LRP8Q14114 963 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 ADGRE1Q14246 886 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 CNGA3Q16281 694 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 PAN2Q504Q3 1202 aaKnown RBP9.95□□□□□ -0.82
MSH2-202ENST00000406134 FSCBQ5H9T9 825 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 PIK3R6Q5UE93 754 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 BEND5Q7L4P6 421 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 LCA5Q86VQ0 697 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 UBXN10Q96LJ8 280 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms