RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 HSPA14Q0VDF9 509 aa9.19□□□□□ -0.94
LIG4-202ENST00000405925 CMTM8Q8IZV2 173 aa9.19□□□□□ -0.94
LIG4-202ENST00000405925 OR8D1Q8WZ84 308 aa9.19□□□□□ -0.94
LIG4-202ENST00000405925 MFSD3Q96ES6 412 aa9.19□□□□□ -0.94
LIG4-202ENST00000405925 CHRAC1Q9NRG0 131 aa9.19□□□□□ -0.94
LIG4-202ENST00000405925 TDP1Q9NUW8 608 aa9.19□□□□□ -0.94
LIG4-202ENST00000405925 ADA2Q9NZK5 511 aa9.19□□□□□ -0.94
LIG4-202ENST00000405925 CCL22O00626 93 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 TPP1O14773 563 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 TM9SF1O15321 606 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 GCATO75600 419 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 RFPL2O75678 378 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 ABHD2P08910 425 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CNPP09543 421 aaKnown RBP9.18□□□□□ -0.94
LIG4-202ENST00000405925 NUDT17P0C025 328 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 VCLP18206 1134 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CES1P23141 567 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CRABP2P29373 138 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 BMPR1AP36894 532 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 DGKGP49619 791 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CAP1Q01518 475 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 TCEA2Q15560 299 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CYP1B1Q16678 543 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 ANKRD20A4Q4UJ75 823 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 SPDYCQ5MJ68 293 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 LRRC8BQ6P9F7 803 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 LEMD2Q8NC56 503 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 OR4K2Q8NGD2 314 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CXorf40AQ8TE69 158 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 MFSD1Q9H3U5 465 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 DNAJC16Q9Y2G8 782 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 L3MBTL1Q9Y468 752 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 BACE2Q9Y5Z0 518 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 WNT6Q9Y6F9 365 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 DOCK1Q14185 1865 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 NRXN2Q9P2S2 1712 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 LOC100653049A0A140TA62 436 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 BTN3A1O00481 513 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 GABRDO14764 452 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 KRT34O76011 436 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CYP11A1P05108 521 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 MPOP05164 745 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 TPBGLP0DKB5 382 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 FSHRP23945 695 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 AARSP49588 968 aaKnown RBP eCLIP9.18□□□□□ -0.94
LIG4-202ENST00000405925 NAB1Q13506 487 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CUL3Q13618 768 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 LRRC26Q2I0M4 334 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 ATXN7L2Q5T6C5 722 aaPredicted RBP9.18□□□□□ -0.94
LIG4-202ENST00000405925 FAM151BQ6UXP7 276 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 STK40Q8N2I9 435 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 TOP1MTQ969P6 601 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 PANX3Q96QZ0 392 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 APPL1Q9UKG1 709 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CDYLQ9Y232 598 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.18□□□□□ -0.94
LIG4-202ENST00000405925 CNTN5O94779 1100 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 TMEM63AO94886 807 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 APODP05090 189 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 MLNP12872 115 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 ACVRL1P37023 503 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CSKP41240 450 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CHRNA4P43681 627 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 SLC10A7Q0GE19 358 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 HIC1Q14526 733 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 FNBP1LQ5T0N5 605 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 AFTPHQ6ULP2 937 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 ZCCHC23Q6ZST2 131 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 DET1Q7L5Y6 550 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 SLC41A1Q8IVJ1 513 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 TUBGCP3Q96CW5 907 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 RSRC1Q96IZ7 334 aaKnown RBP9.18□□□□□ -0.94
LIG4-202ENST00000405925 MAGEB18Q96M61 343 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 NUF2Q9BZD4 464 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 NMRAL1Q9HBL8 299 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 OGDHLQ9ULD0 1010 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 MFHAS1Q9Y4C4 1052 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 CITO14578 2027 aa9.18□□□□□ -0.94
LIG4-202ENST00000405925 COCHO43405 550 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 SNAP91O60641 907 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 ATP5HO75947 161 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 MZF1P28698 734 aaPredicted RBP9.17□□□□□ -0.94
LIG4-202ENST00000405925 ERFP50548 548 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 GAD2Q05329 585 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 CCDC85BQ15834 202 aaPredicted RBP9.17□□□□□ -0.94
LIG4-202ENST00000405925 RAB6CQ53S08 254 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 MS4A13Q5J8X5 152 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 LHX8Q68G74 356 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 RAET1GQ6H3X3 334 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 PKN3Q6P5Z2 889 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 IQCKQ8N0W5 287 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 GLIS1Q8NBF1 620 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 FLCNQ8NFG4 579 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 CASD1Q96PB1 797 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 RAB6CQ9H0N0 254 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 COMMD8Q9NX08 183 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 GRHL1Q9NZI5 618 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 CCDC160A6NGH7 325 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 IFRD1O00458 451 aaPredicted RBP9.17□□□□□ -0.94
LIG4-202ENST00000405925 INSIG1O15503 277 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms