RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 RNASEH1O60930 286 aaKnown RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 C1QL1O75973 258 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 EPHX1P07099 455 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 HOXB2P14652 356 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 DPP6P42658 865 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 IL12RB1P42701 662 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 SERPINH1P50454 418 aaKnown RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 IL10RBQ08334 325 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 HNRNPDQ14103 355 aaKnown RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 TRIP6Q15654 476 aaKnown RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 CRY1Q16526 586 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 PTPRNQ16849 979 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 DUOXA1Q1HG43 343 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 HNRNPA1L2Q32P51 320 aaKnown RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 INO80DQ53TQ3 878 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 TMEM92Q6UXU6 159 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 BBS12Q6ZW61 710 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 DSG4Q86SJ6 1040 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 ARHGAP12Q8IWW6 846 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 SLC35F6Q8N357 371 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 SH2D3CQ8N5H7 860 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 PLD5Q8N7P1 536 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 MAIP1Q8WWC4 291 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 HAUS1Q96CS2 278 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 PBKQ96KB5 322 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 RPL10LQ96L21 214 aaKnown RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 ZNF599Q96NL3 588 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 PSMB7Q99436 277 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 NAP1L3Q99457 506 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 GABRG3Q99928 467 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 KLC2Q9H0B6 622 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 NOL6Q9H6R4 1146 aaKnown RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 UBA2Q9UBT2 640 aaPredicted RBP10.73□□□□□ -0.69
RPAIN-204ENST00000405578 ZKSCAN5Q9Y2L8 839 aa10.73□□□□□ -0.69
RPAIN-204ENST00000405578 MUC22E2RYF6 1773 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ZNF462Q96JM2 2506 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 CTAGE9A4FU28 777 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 APOC4-APOC2K7ER74 178 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 SGK1O00141 431 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ENC1O14682 589 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 MCF2LO15068 1137 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 MTSS1O43312 755 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ATP9BO43861 1147 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 MFSD11O43934 449 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 SH3BP5O60239 455 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ZMPSTE24O75844 475 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 APOC2P02655 101 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 HOXD12P35452 270 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 GARSP41250 739 aaKnown RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 WASP42768 502 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 CTSOP43234 321 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 NUMBP49757 651 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 STK19P49842 368 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 RENBPP51606 427 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 GBE1Q04446 702 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ZNF33AQ06730 810 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 GALNT2Q10471 571 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 SFSWAPQ12872 951 aaKnown RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ZNF211Q13398 564 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ENPP2Q13822 863 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ZNF235Q14590 738 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 LLGL1Q15334 1064 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 DLG2Q15700 870 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 PEAR1Q5VY43 1037 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 LINGO4Q6UY18 593 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 PCDH20Q8N6Y1 951 aaKnown RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 ISG20Q96AZ6 181 aaKnown RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 TSGA13Q96PP4 275 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 UBL7Q96S82 380 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 NAPGQ99747 312 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 CINPQ9BW66 212 aaPredicted RBP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 TLR10Q9BXR5 811 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 TMEM245Q9H330 911 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 CAPN10Q9HC96 672 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 DTLQ9NZJ0 730 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 BCCIPQ9P287 314 aaKnown RBP eCLIP10.72□□□□□ -0.69
RPAIN-204ENST00000405578 SEPT3Q9UH03 358 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 SLCO3A1Q9UIG8 710 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 MFHAS1Q9Y4C4 1052 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
RPAIN-204ENST00000405578 TTC34A8MYJ7 566 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 HACD1B0YJ81 288 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 CEP104O60308 925 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 MAFKO60675 156 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 STK10O94804 968 aaKnown RBP10.71□□□□□ -0.69
RPAIN-204ENST00000405578 TMCC1O94876 653 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 IGSF6O95976 241 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 MT-CO1P00395 513 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 TUBB4AP04350 444 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 SERPINF2P08697 491 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 SRCP12931 536 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 PLA2G2AP14555 144 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 TCP1P17987 556 aaKnown RBP10.71□□□□□ -0.69
RPAIN-204ENST00000405578 GLDCP23378 1020 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 CCNCP24863 283 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 HSPA9P38646 679 aaKnown RBP10.71□□□□□ -0.69
RPAIN-204ENST00000405578 RHOAP61586 193 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 SNRPD1P62314 119 aaKnown RBP10.71□□□□□ -0.69
RPAIN-204ENST00000405578 ARF5P84085 180 aa10.71□□□□□ -0.69
RPAIN-204ENST00000405578 RAD51Q06609 339 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms