RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 ZFR2Q9UPR6 939 aaKnown RBP18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 FADS3Q9Y5Q0 445 aa18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 ASCC3Q8N3C0 2202 aaKnown RBP18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 PALMO75781 387 aa18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 RGRP47804 291 aa18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 ZNF75DP51815 510 aa18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 MESDQ14696 234 aa18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 NAXDQ8IW45 347 aa18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 TC2NQ8N9U0 490 aa18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 SLC35G2Q8TBE7 412 aa18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 SETD7Q8WTS6 366 aaKnown RBP18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 IPO11Q9UI26 975 aaKnown RBP18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 TPX2Q9ULW0 747 aaKnown RBP18.42■□□□□ 0.54
PTPRN2-204ENST00000404321 CACNA1EQ15878 2313 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 UPK3BL1B0FP48 263 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 UPK3BL2E5RIL1 263 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 NEMP1O14524 444 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 ITIH2P19823 946 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 SIM1P81133 766 aaPredicted RBP18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 RAD51Q06609 339 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 SLC14A1Q13336 389 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 STAT4Q14765 748 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 SLC45A4Q5BKX6 768 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 TSEN2Q8NCE0 465 aaKnown RBP18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 SKA1Q96BD8 255 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 LRIG1Q96JA1 1093 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 CINPQ9BW66 212 aaPredicted RBP18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 CALN1Q9BXU9 219 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 OSBPL1AQ9BXW6 950 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 DMTF1Q9Y222 760 aa18.41■□□□□ 0.54
PTPRN2-204ENST00000404321 PRAMEF26H0Y7S4 382 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 TLR4O00206 839 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 SPINT1O43278 529 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 IL4RP24394 825 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 CLDN2P57739 230 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 FGL2Q14314 439 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 ZFYVE27Q5T4F4 411 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 NEK5Q6P3R8 708 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 TTC7BQ86TV6 843 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 LZTR1Q8N653 840 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 KCTD6Q8NC69 237 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 TSC1Q92574 1164 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 GDF3Q9NR23 364 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 BTBD3Q9Y2F9 522 aa18.4■□□□□ 0.54
PTPRN2-204ENST00000404321 KNL1Q8NG31 2342 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 CHD5Q8TDI0 1954 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 PAK4O96013 591 aaPredicted RBP18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 AKT2P31751 481 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 NUDT1P36639 197 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 CCT8P50990 548 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 ARSEP51690 589 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 NXPH1P58417 271 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 IL10RBQ08334 325 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 ZNF423Q2M1K9 1284 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 TMEM259Q4ZIN3 620 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 SPATS2Q86XZ4 545 aaKnown RBP18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 CAMK1DQ8IU85 385 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 MFSD2AQ8NA29 543 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 FEM1CQ96JP0 617 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 ELF4Q99607 663 aaPredicted RBP18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 PLXNA2O75051 1894 aa18.39■□□□□ 0.53
PTPRN2-204ENST00000404321 TTC24A2A3L6 582 aaPredicted RBP18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 IGLON5A6NGN9 336 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 MUSKO15146 869 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 RAD51BO15315 384 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 BUB1BO60566 1050 aaPredicted RBP18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 ZNF883P0CG24 379 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 TIMP2P16035 220 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 HNRNPA2B1P22626 353 aaKnown RBP18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 RPS21P63220 83 aaKnown RBP18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 SLC10A7Q0GE19 358 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 FOXC1Q12948 553 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 DPYSL3Q14195 570 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 KIAA1161Q6NSJ0 714 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 SRLQ86TD4 932 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 GATAD2AQ86YP4 633 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 ATPAF2Q8N5M1 289 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 TMEM145Q8NBT3 493 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 RHBDD1Q8TEB9 315 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 SLC17A9Q9BYT1 436 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 PCOLCE2Q9UKZ9 415 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 TFR2Q9UP52 801 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 HYOU1Q9Y4L1 999 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 PCDHB9Q9Y5E1 797 aa18.38■□□□□ 0.53
PTPRN2-204ENST00000404321 TSPAN6O43657 245 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 AP1G1O43747 822 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 MFSD11O43934 449 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 MAP3K6O95382 1288 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 TOP3BO95985 862 aaKnown RBP18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 PRKCGP05129 697 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 XPAP23025 273 aaPredicted RBP18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 MAN1A1P33908 653 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 SEMG2Q02383 582 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 LBRQ14739 615 aaKnown RBP18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 SHBQ15464 509 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 TRIP6Q15654 476 aaKnown RBP18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 CFAP58Q5T655 872 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 TMCO4Q5TGY1 634 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 KDM7AQ6ZMT4 941 aa18.37■□□□□ 0.53
PTPRN2-204ENST00000404321 OR13H1Q8NG92 308 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms