RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ADRA1DP25100 572 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 SERPINH1P50454 418 aaKnown RBP25.92■■□□□ 1.74
CPNE1-205ENST00000401607 TEDDM1Q5T9Z0 273 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 KCNMB4Q86W47 210 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 FEM1CQ96JP0 617 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 EXOC2Q96KP1 924 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 NOD2Q9HC29 1040 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 C20orf96Q9NUD7 363 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-205ENST00000401607 TDP1Q9NUW8 608 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 RFPL1O75677 317 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 CNTFP26441 200 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 GBP2P32456 591 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-205ENST00000401607 SLC14A2Q15849 920 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 HSP90AA5PQ58FG0 334 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 DCAF4L2Q8NA75 395 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 RANBP9Q96S59 729 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 AGAP2Q99490 1192 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 NKX2-4Q9H2Z4 354 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 TREX1Q9NSU2 369 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 VPS51Q9UID3 782 aa25.92■■□□□ 1.74
CPNE1-205ENST00000401607 TMCC1O94876 653 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 ASMTLO95671 621 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 SERPINF2P08697 491 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 PYGBP11216 843 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 CDK18Q07002 472 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 MROH9Q5TGP6 573 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 FYB2Q5VWT5 728 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 ESRP1Q6NXG1 681 aaKnown RBP25.91■■□□□ 1.74
CPNE1-205ENST00000401607 APCDD1Q8J025 514 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 GDAP1Q8TB36 358 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 DYDC1Q8WWB3 177 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 ZSWIM3Q96MP5 696 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 ZNF317Q96PQ6 595 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-205ENST00000401607 CPNE1Q99829 537 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 SLC2A6Q9UGQ3 507 aa25.91■■□□□ 1.74
CPNE1-205ENST00000401607 CEBPBP17676 345 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 GP5P40197 560 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 ARMC3Q5W041 872 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 TIFABQ6ZNK6 161 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 CKAP2Q8WWK9 683 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 ATP2A3Q93084 1043 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 APOPT1Q96IL0 206 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 TRIB3Q96RU7 358 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 ERICH4A6NGS2 130 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 INSIG1O15503 277 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 EPOP01588 193 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 ARNTP27540 789 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 CCNFP41002 786 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 LMAN2Q12907 356 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 SEPT6Q14141 434 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 ZNF77Q15935 545 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 DUSP6Q16828 381 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 INO80DQ53TQ3 878 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-205ENST00000401607 PDPK2PQ6A1A2 396 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 RNF135Q8IUD6 432 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 FIBINQ8TAL6 211 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 IFT43Q96FT9 208 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 CCT8L2Q96SF2 557 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 TLE6Q9H808 572 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 LHX3Q9UBR4 397 aa25.9■■□□□ 1.74
CPNE1-205ENST00000401607 ZWINTO95229 277 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 HLA-DPA1P20036 260 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 ARCN1P48444 511 aaKnown RBP25.89■■□□□ 1.73
CPNE1-205ENST00000401607 SCNN1BP51168 640 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 NEK3P51956 506 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 USP4Q13107 963 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 C12orf76Q8N812 135 aaPredicted RBP25.89■■□□□ 1.73
CPNE1-205ENST00000401607 TCP10LQ8TDR4 215 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 GDPD5Q8WTR4 605 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 ING5Q8WYH8 240 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 CHMP6Q96FZ7 201 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 NUDCD1Q96RS6 583 aa25.89■■□□□ 1.73
CPNE1-205ENST00000401607 IARS2Q9NSE4 1012 aaKnown RBP25.89■■□□□ 1.73
CPNE1-205ENST00000401607 HEATR9A2RTY3 570 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 GOLGA8TH3BQL2 631 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 ZNF197O14709 1029 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 FAM107AO95990 144 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 ITGA2BP08514 1039 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 F7P08709 466 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-205ENST00000401607 NRIP1P48552 1158 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 GRTP1Q5TC63 336 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 TAX1BP1Q86VP1 789 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 LMLNQ96KR4 655 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 SCUBE2Q9NQ36 999 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 TXNDC16Q9P2K2 825 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 GRID1Q9ULK0 1009 aa25.88■■□□□ 1.73
CPNE1-205ENST00000401607 EPOPA6NHQ4 379 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 CYBBP04839 570 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 FGF1P05230 155 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 CD70P32970 193 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 DMTNQ08495 405 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 GALNT3Q14435 633 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 CNGA3Q16281 694 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 KIAA0930Q6ICG6 404 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 ELMSAN1Q6PJG2 1045 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 STRA8Q7Z7C7 330 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 VN1R2Q8NFZ6 395 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 ITFG1Q8TB96 612 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 SMG7Q92540 1137 aaKnown RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 RBBP8Q99708 897 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms