RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 PCDH12Q9NPG4 1184 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 VTI1BQ9UEU0 232 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 POLG2Q9UHN1 485 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FBXO10Q9UK96 956 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 GTF2A1LQ9UNN4 478 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CHKBQ9Y259 395 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TNFSF13BQ9Y275 285 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 DYRK1BQ9Y463 629 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NR2E3Q9Y5X4 410 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 A0A087X1B8 175 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 C1orf232A0A0U1RR37 186 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RGSL1A5PLK6 1076 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 H3BN98 237 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 KIF1CO43896 1103 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 SNX3O60493 162 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TLR5O60602 858 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FKBP6O75344 327 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ACADSP16219 412 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZNF7P17097 686 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 ITGALP20701 1170 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 EPHA3P29320 983 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 GRK4P32298 578 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ABL2P42684 1182 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FLT3LGP49771 235 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MAPK10P53779 464 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PRKAG1P54619 331 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SGCGQ13326 291 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PHKG1Q16816 387 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PPM1LQ5SGD2 360 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FBXL19Q6PCT2 694 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 C15orf52Q6ZUT6 534 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 PLEKHM3Q6ZWE6 761 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SNX32Q86XE0 403 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 LZTR1Q8N653 840 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TMCO5AQ8N6Q1 288 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZNF384Q8TF68 577 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NACC2Q96BF6 587 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 KLRG1Q96E93 195 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 B3GALT6Q96L58 329 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 NSMCE2Q96MF7 247 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZMAT2Q96NC0 199 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 RMND5AQ9H871 391 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TMPRSS4Q9NRS4 437 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 VPS45Q9NRW7 570 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SPG21Q9NZD8 308 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 OPTCQ9UBM4 332 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CDH9Q9ULB4 789 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SYNPO2Q9UMS6 1093 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZNF646O15015 1829 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZNF236Q9UL36 1845 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 BCL9LQ86UU0 1499 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 hCG_1818297A0A087WSY0 165 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TRAV19A0A0A6YYK7 116 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 KLRG2A4D1S0 409 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 LRATO95237 230 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 C1RP00736 705 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 LINC00032P0C843 101 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 EPORP19235 508 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TYMPP19971 482 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CYP2A7P20853 494 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RPL9P32969 192 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 SOX6P35712 828 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CRYBB1P53674 252 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 ATXN1P54253 815 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 MARSP56192 900 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 OASLQ15646 514 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZIK1Q3SY52 487 aaPredicted RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 PTPN20Q4JDL3 420 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 FBXO48Q5FWF7 155 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 LIPMQ5VYY2 423 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 EEF1DP3Q658K8 133 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 GCNT7Q6ZNI0 430 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 SH3BP5LQ7L8J4 393 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 ZNF438Q7Z4V0 828 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TMEM139Q8IV31 216 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 TMEM132CQ8N3T6 1108 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PCDH20Q8N6Y1 951 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 SLC4A5Q9BY07 1137 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 DUSP16Q9BY84 665 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 PHACTR1Q9C0D0 580 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 HSD3B7Q9H2F3 369 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 MRPL17Q9NRX2 175 aaKnown RBP3.29□□□□□ -1.88
KNL1-202ENST00000399668 PRKAG3Q9UGI9 489 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 CROTQ9UKG9 612 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 C2CD2Q9Y426 696 aa3.29□□□□□ -1.88
KNL1-202ENST00000399668 RBAK-RBAKDNI3L0D1 243 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 HS6ST1O60243 411 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 ZNF862O60290 1169 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 B4GALT4O60513 344 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 TOMM70O94826 608 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 TFEBP19484 476 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 OR1D2P34982 312 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 NDUFV1P49821 464 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 CYP4F2P78329 520 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 CYP4F3Q08477 520 aa3.28□□□□□ -1.88
KNL1-202ENST00000399668 AUHQ13825 339 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 TARBP2Q15633 366 aaKnown RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 TRIP4Q15650 581 aaPredicted RBP3.28□□□□□ -1.88
KNL1-202ENST00000399668 PDK4Q16654 411 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms