RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 APOC4-APOC2K7ER74 178 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 TIMP1P01033 207 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 APOC2P02655 101 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 RB1P06400 928 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
USP47-203ENST00000399455 GLRBP48167 497 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SPATA21Q7Z572 469 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SH3RF2Q8TEC5 729 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 PROX1Q92786 737 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 COPS8Q99627 209 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 BTBD1Q9H0C5 482 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ISCUQ9H1K1 167 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 RIPK3Q9Y572 518 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SQORQ9Y6N5 450 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 A0A0A0MRY4 1105 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 SLC28A1O00337 649 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 TRAFD1O14545 582 aaPredicted RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 ATP9AO75110 1047 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 GYPCP04921 128 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 FGRP09769 529 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 NDUFS1P28331 727 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 GP5P40197 560 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 CLCN5P51795 746 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 PMS1P54277 932 aaKnown RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 ITGB3BPQ13352 177 aaPredicted RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 RRP1BQ14684 758 aaKnown RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 SHROOM1Q2M3G4 852 aaPredicted RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 ZNF792Q3KQV3 632 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 TXNDC11Q6PKC3 985 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ETNPPLQ8TBG4 499 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ASZ1Q8WWH4 475 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 SPATA13Q96N96 652 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 LMAN2LQ9H0V9 348 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 CDC14AQ9UNH5 594 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 SHPRHQ149N8 1683 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 CPED1A4D0V7 1026 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 E9PBE3 544 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ZBTB39O15060 712 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 PDX1P52945 283 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 STX4Q12846 297 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 MAPK7Q13164 816 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 PPP1R26Q5T8A7 1209 aaPredicted RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 LRRC74BQ6ZQY2 392 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 C17orf64Q86WR6 236 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 SLC9A9Q8IVB4 645 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 KIAA0895Q8NCT3 520 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ADCY4Q8NFM4 1077 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 BRSK1Q8TDC3 778 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 KCTD13Q8WZ19 329 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 FAM120BQ96EK7 910 aaKnown RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 MFSD14AQ96MC6 490 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 CDHR5Q9HBB8 845 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 BPIFA1Q9NP55 256 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ADPRHL2Q9NX46 363 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 LZTS1Q9Y250 596 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 GLYATL1P3A0A0U1RQE8 302 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 TCP11X1B4DZS4 312 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 RHOQP17081 205 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ACSM2AQ08AH3 577 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ITPRIPL2Q3MIP1 535 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ACSM2BQ68CK6 577 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 KATNAL2Q8IYT4 538 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 NPLOC4Q8TAT6 608 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 STAG3L4Q8TBR4 150 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 SIPA1Q96FS4 1042 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 GSDMCQ9BYG8 508 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 DNAJC28Q9NX36 388 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ZNF214Q9UL59 606 aaPredicted RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 E9PAM4 449 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 UBXN7O94888 489 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 CCNYL3P0C7X3 344 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 JMJD7P0C870 316 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ITGB5P18084 799 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 PGM1P36871 562 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 CDK16Q00536 496 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 IRF8Q02556 426 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.01□□□□□ -1.13
USP47-203ENST00000399455 XKR6Q5GH73 641 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 GATAD2AQ86YP4 633 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 P3H2Q8IVL5 708 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ATAD1Q8NBU5 361 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 PRICKLE1Q96MT3 831 aaPredicted RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 TMEM216Q9P0N5 145 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 NAALADL1Q9UQQ1 740 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 A0A087X0T9 212 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 OR4Q2P0C623 313 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 KDELR1P24390 212 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 AP1S1P61966 158 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 LSM12Q3MHD2 195 aaKnown RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 CAPN13Q6MZZ7 669 aaPredicted RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 SH3BP5LQ7L8J4 393 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 FCRL2Q96LA5 508 aaPredicted RBP8.01□□□□□ -1.13
USP47-203ENST00000399455 ROGDIQ9GZN7 287 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 NEUROD4Q9HD90 331 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ZC4H2Q9NQZ6 224 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 PCDHB1Q9Y5F3 818 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 AIM2O14862 343 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 ZNF185O15231 689 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 VAPBO95292 243 aa8.01□□□□□ -1.13
USP47-203ENST00000399455 KRT75O95678 551 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms