RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 SKA1Q96BD8 255 aa12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 POM121Q96HA1 1249 aa12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 ACE2Q9BYF1 805 aaPredicted RBP12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 CEP44Q9C0F1 390 aa12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 MAGEH1Q9H213 219 aa12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 GAREM1Q9H706 876 aa12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 HPCAL4Q9UM19 191 aa12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 ANKRD6Q9Y2G4 727 aa12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 SLCO1B1Q9Y6L6 691 aa12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 TNRC6BQ9UPQ9 1833 aaKnown RBP12.01□□□□□ -0.49
SMIM11A-201ENST00000399292 CXorf51AA0A1B0GTR3 108 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 DDX3XO00571 662 aaKnown RBP eCLIP12□□□□□ -0.49
SMIM11A-201ENST00000399292 RAMP2O60895 175 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 GJB3O75712 270 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 CER1O95813 267 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 PRNPP04156 253 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 CD59P13987 128 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 PSMA2P25787 234 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 EPHB2P29323 1055 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 ACVRL1P37023 503 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 PBX1P40424 430 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 GRIA4P48058 902 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 SERPINH1P50454 418 aaKnown RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 DNA2P51530 1060 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 METAP1P53582 386 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 GEMIN4P57678 1058 aaKnown RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 RACK1P63244 317 aaKnown RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 ARF5P84085 180 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 BNC1Q01954 994 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 CNTN1Q12860 1018 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 HNRNPDQ14103 355 aaKnown RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 POLD3Q15054 466 aaPredicted RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 KIF19Q2TAC6 998 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 POM121L1PQ3SYA9 428 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 E4F1Q66K89 784 aaPredicted RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 TMC6Q7Z403 805 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 PRPF39Q86UA1 669 aaKnown RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 PYROXD2Q8N2H3 581 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 PCDH20Q8N6Y1 951 aaKnown RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 CPLX3Q8WVH0 158 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 SYN2Q92777 582 aaPredicted RBP12□□□□□ -0.49
SMIM11A-201ENST00000399292 FAM131CQ96AQ9 280 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 IQCDQ96DY2 449 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 ORAI3Q9BRQ5 295 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 TNKS2Q9H2K2 1166 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 DYRK4Q9NR20 520 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 IL36AQ9UHA7 158 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 FZD10Q9ULW2 581 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 SNX11Q9Y5W9 270 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 CHD6Q8TD26 2715 aa12□□□□□ -0.49
SMIM11A-201ENST00000399292 TMEM191CA6NGB0 347 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 C10orf142B7Z368 130 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 PLK4O00444 970 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 KPNA3O00505 521 aaPredicted RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 VILLO15195 856 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 PLRG1O43660 514 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CREB3O43889 395 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 SH3BP5O60239 455 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 ZNF821O75541 412 aaPredicted RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 RNF8O76064 485 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CTSLP07711 333 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 ZNF883P0CG24 379 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 C21orf59P57076 290 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 PCBP4P57723 403 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 ZBED6P86452 979 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 OGDHQ02218 1023 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 ZNF252P-AS1Q0IIN9 211 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 TDRD12Q587J7 1177 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CARD16Q5EG05 197 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 C22orf39Q6P5X5 142 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 DPY19L3Q6ZPD9 716 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 VPS36Q86VN1 386 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 DNAAF5Q86Y56 855 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 DEPDC4Q8N2C3 294 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 RTL3Q8N8U3 475 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CHST14Q8NCH0 376 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 ISG20Q96AZ6 181 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 TRIM11Q96F44 468 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 SLC6A18Q96N87 628 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 ISCUQ9H1K1 167 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CATSPERBQ9H7T0 1116 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 EBF2Q9HAK2 575 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 IL21RQ9HBE5 538 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 MRPL47Q9HD33 250 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 AASDHPPTQ9NRN7 309 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 TM7SF3Q9NS93 570 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 DONSONQ9NYP3 566 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 IFNKQ9P0W0 207 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CNOT8Q9UFF9 292 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 ANGPTL2Q9UKU9 493 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CAPN11Q9UMQ6 739 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 LUC7L2Q9Y383 392 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 SCINQ9Y6U3 715 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CEP192Q8TEP8 1941 aa11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 CNOT1A5YKK6 2376 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-201ENST00000399292 ZSCAN5CA6NGD5 496 aaPredicted RBP11.98□□□□□ -0.49
SMIM11A-201ENST00000399292 KCNK3O14649 394 aa11.98□□□□□ -0.49
SMIM11A-201ENST00000399292 LATO43561 262 aa11.98□□□□□ -0.49
SMIM11A-201ENST00000399292 KDELR3O43731 214 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms