RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 HLA-BQ31612 363 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 NAPEPLDQ6IQ20 393 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 IL27RAQ6UWB1 636 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 TMCO3Q6UWJ1 677 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 DBX2Q6ZNG2 339 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 PRPF39Q86UA1 669 aaKnown RBP16.93■□□□□ 0.3
APTR-201ENST00000398043 HORMAD1Q86X24 394 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 TMEM145Q8NBT3 493 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 PCDH19Q8TAB3 1148 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 SERAC1Q96JX3 654 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 NSMCE3Q96MG7 304 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 KLHL32Q96NJ5 620 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 GAREM1Q9H706 876 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 DYRK4Q9NR20 520 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 DKK3Q9UBP4 350 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 DMTF1Q9Y222 760 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 FNDC3AQ9Y2H6 1198 aaKnown RBP16.93■□□□□ 0.3
APTR-201ENST00000398043 A0A1W2PQU0 124 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 TSPAN11A1L157 253 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 DFFAO00273 331 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 GIPC1O14908 333 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 AREL1O15033 823 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 MUSKO15146 869 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 BUB1BO60566 1050 aaPredicted RBP16.92■□□□□ 0.3
APTR-201ENST00000398043 MAFKO60675 156 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 CER1O95813 267 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 CD38P28907 300 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 MAT2AP31153 395 aaKnown RBP16.92■□□□□ 0.3
APTR-201ENST00000398043 HADHBP55084 474 aaKnown RBP16.92■□□□□ 0.3
APTR-201ENST00000398043 FGL2Q14314 439 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 MESDQ14696 234 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 RFTN1Q14699 578 aaPredicted RBP16.92■□□□□ 0.3
APTR-201ENST00000398043 PDK2Q15119 407 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 ZNF423Q2M1K9 1284 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 GDPD4Q6W3E5 623 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 CCDC170Q8IYT3 715 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 RYBPQ8N488 228 aaPredicted RBP16.92■□□□□ 0.3
APTR-201ENST00000398043 TSEN2Q8NCE0 465 aaKnown RBP16.92■□□□□ 0.3
APTR-201ENST00000398043 RAB7BQ96AH8 199 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 EXOC2Q96KP1 924 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 ZNF599Q96NL3 588 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 ZNF670Q9BS34 389 aa16.92■□□□□ 0.3
APTR-201ENST00000398043 PTPRBP23467 1997 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 COL5A1P20908 1838 aaPredicted RBP16.91■□□□□ 0.3
APTR-201ENST00000398043 GOLGA4Q13439 2230 aaKnown RBP16.91■□□□□ 0.3
APTR-201ENST00000398043 C3orf70A6NLC5 250 aaPredicted RBP16.91■□□□□ 0.3
APTR-201ENST00000398043 PALMO75781 387 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 KRT7P08729 469 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 CEACAM1P13688 526 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 SSR1P43307 286 aaKnown RBP16.91■□□□□ 0.3
APTR-201ENST00000398043 NSUN2Q08J23 767 aaKnown RBP eCLIP16.91■□□□□ 0.3
APTR-201ENST00000398043 SLC10A7Q0GE19 358 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 KRT81Q14533 505 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 PAFAH1B3Q15102 231 aaKnown RBP16.91■□□□□ 0.3
APTR-201ENST00000398043 SETMARQ53H47 684 aaPredicted RBP16.91■□□□□ 0.3
APTR-201ENST00000398043 ANKRD20A8PQ5CZ79 823 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 SEL1L3Q68CR1 1132 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 NCBP2-AS2Q69YL0 99 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 FBXL19Q6PCT2 694 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 PQLC3Q8N755 202 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 MFSD2AQ8NA29 543 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 HCAR2Q8TDS4 363 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 RAPGEF5Q92565 580 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 PSKH2Q96QS6 385 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 SP110Q9HB58 689 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 GGT7Q9UJ14 662 aa16.91■□□□□ 0.3
APTR-201ENST00000398043 LRP4O75096 1905 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 TMEM110-MUSTN1A8MSY1 372 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 PRAMEF26H0Y7S4 382 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 H0Y8X5 98 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 KCNK3O14649 394 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 PIGNO95427 931 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 ADRB1P08588 477 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 TIMP2P16035 220 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 RAD51Q06609 339 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 SHBQ15464 509 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 N4BP2L1Q5TBK1 243 aaPredicted RBP16.9■□□□□ 0.3
APTR-201ENST00000398043 TMCO4Q5TGY1 634 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 KIAA1161Q6NSJ0 714 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 PSAPL1Q6NUJ1 521 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 IQCHQ86VS3 1027 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 SPATS2Q86XZ4 545 aaKnown RBP16.9■□□□□ 0.3
APTR-201ENST00000398043 PGBD5Q8N414 524 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 KCTD6Q8NC69 237 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 DEFB124Q8NES8 71 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 KLK6Q92876 244 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 TUBGCP5Q96RT8 1024 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 C1QTNF2Q9BXJ5 285 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 AASDHPPTQ9NRN7 309 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 TM7SF3Q9NS93 570 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 KLHL11Q9NVR0 708 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 ITM2BQ9Y287 266 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 CA5BQ9Y2D0 317 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 PCDHGB2Q9Y5G2 931 aa16.9■□□□□ 0.3
APTR-201ENST00000398043 SOWAHDA6NJG2 315 aa16.89■□□□□ 0.29
APTR-201ENST00000398043 ZNF487B1APH4 448 aa16.89■□□□□ 0.29
APTR-201ENST00000398043 TLR4O00206 839 aa16.89■□□□□ 0.29
APTR-201ENST00000398043 SLC31A1O15431 190 aa16.89■□□□□ 0.29
APTR-201ENST00000398043 TSPAN6O43657 245 aa16.89■□□□□ 0.29
APTR-201ENST00000398043 MFSD11O43934 449 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms