RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 FRRS1LQ9P0K9 344 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 FZD4Q9ULV1 537 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MMP17Q9ULZ9 603 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SLC8A2Q9UPR5 921 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CTNND2Q9UQB3 1225 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CEP192Q8TEP8 1941 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TMEM8BA6NDV4 472 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 LRRC14BA6NHZ5 514 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 KCNJ18B7U540 433 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 FGF10O15520 208 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 APOEP02649 317 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RETP07949 1114 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TPM1P09493 284 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ADH5P11766 374 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MYL4P12829 197 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CTSSP25774 331 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 GALNSP34059 522 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MTIF2P46199 727 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HSPA7P48741 367 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HCAR3P49019 387 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 DAOAP59103 153 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 OSTNP61366 133 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 YWHAGP61981 247 aaKnown RBP eCLIP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RAB1AP62820 205 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ILF2Q12905 390 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SLC14A1Q13336 389 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 KCNJ12Q14500 433 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RFTN1Q14699 578 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CRY1Q16526 586 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PFKFB4Q16877 469 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ARL13BQ3SXY8 428 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 GRAMD4Q6IC98 578 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 GAREM2Q75VX8 874 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 DSG4Q86SJ6 1040 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TMEM150AQ86TG1 271 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RBM23Q86U06 439 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 KBTBD6Q86V97 674 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 DCP2Q8IU60 420 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 NELFCDQ8IXH7 590 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SYTL1Q8IYJ3 562 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 OR10H5Q8NGA6 315 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RNF139Q8WU17 664 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 GAB3Q8WWW8 586 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HDAC2Q92769 488 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 USP13Q92995 863 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 BTN2A3PQ96KV6 586 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MDFIQ99750 246 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MRPL45Q9BRJ2 306 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TUBGCP2Q9BSJ2 902 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 FOXQ1Q9C009 403 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CNTD2Q9H8S5 307 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ECT2Q9H8V3 914 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 GOLGA2P5Q9HBQ8 144 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 AIPL1Q9NZN9 384 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RAB23Q9ULC3 237 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SLC12A8A0AV02 714 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 C10orf142B7Z368 130 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 LEFTY2O00292 366 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SCDO00767 359 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PER2O15055 1255 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CLIC2O15247 247 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HTRA2O43464 458 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CYP1A1P04798 512 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CHRNB1P11230 501 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HDCP19113 662 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TEAD1P28347 426 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CSNK1DP48730 415 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SEPHS1P49903 392 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 HADHBP55084 474 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TNK2Q07912 1038 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 OVGP1Q12889 678 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 POLD3Q15054 466 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MPEG1Q2M385 716 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ITPRIPL1Q6GPH6 555 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 FAM173BQ6P4H8 233 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 FRMD7Q6ZUT3 714 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CACNA2D4Q7Z3S7 1137 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ANKS1BQ7Z6G8 1248 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 IQCHQ86VS3 1027 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CXorf67Q86X51 503 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SNX32Q86XE0 403 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 CPNE8Q86YQ8 564 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 ARID3BQ8IVW6 561 aaPredicted RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 LZTR1Q8N653 840 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 NIPA2Q8N8Q9 360 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SIMC1Q8NDZ2 872 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 NEK11Q8NG66 645 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 PLEKHO2Q8TD55 490 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 NETO1Q8TDF5 533 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 TAS1R2Q8TE23 839 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 KAT5Q92993 513 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 GRAMD1AQ96CP6 724 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 RPGRIP1Q96KN7 1286 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SMOQ99835 787 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 BRD8Q9H0E9 1235 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SMYD3Q9H7B4 428 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SGK2Q9HBY8 427 aa3.88□□□□□ -1.79
UBE3A-202ENST00000397954 MRPL47Q9HD33 250 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SSU72Q9NP77 194 aaKnown RBP3.88□□□□□ -1.79
UBE3A-202ENST00000397954 SPHK2Q9NRA0 654 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms