RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 FAM187AA6NFU0 413 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CAPN14A8MX76 684 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 TEX22C9J3V5 150 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 POLR2DO15514 142 aaKnown RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 PAPSS1O43252 624 aaPredicted RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SPOPO43791 374 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CDKL5O76039 1030 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CBX7O95931 251 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CFIP05156 583 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 LTA4HP09960 611 aaKnown RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 PCNAP12004 261 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 EPORP19235 508 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 TRIM21P19474 475 aaKnown RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 GALP22466 123 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SLC6A11P48066 632 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CLCNKAP51800 687 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 UBE2HP62256 183 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 GRAPQ13588 217 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 THOC5Q13769 683 aaKnown RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 MFSD14BQ5SR56 506 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 RIPPLY2Q5TAB7 128 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SERPINA13PQ6UXR4 307 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CYP2R1Q6VVX0 501 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 ZPBP2Q6X784 338 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 ADCK2Q7Z695 626 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 RFX6Q8HWS3 928 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 LRRC49Q8IUZ0 686 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 PLD5Q8N7P1 536 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 LINC00469Q8N7U9 141 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 NAT16Q8N8M0 369 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 TC2NQ8N9U0 490 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 LPCAT1Q8NF37 534 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 HDAC7Q8WUI4 952 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SNX33Q8WV41 574 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 EZH1Q92800 747 aaPredicted RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 BCL2L2Q92843 193 aaPredicted RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 KLHL29Q96CT2 875 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SGF29Q96ES7 293 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 NRBF2Q96F24 287 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 NAF1Q96HR8 494 aaKnown RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 PGAM5Q96HS1 289 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SAMD8Q96LT4 415 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 DDX50Q9BQ39 737 aaKnown RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CLSTN3Q9BQT9 956 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CARD6Q9BX69 1037 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 MRPL1Q9BYD6 325 aaKnown RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 FOXP3Q9BZS1 431 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 TINAGL1Q9GZM7 467 aaPredicted RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 NRDE2Q9H7Z3 1164 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 NGBQ9NPG2 151 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SMPD3Q9NY59 655 aaPredicted RBP6.91□□□□□ -1.3
SMCO1-201ENST00000397537 MPP6Q9NZW5 540 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 ASH2LQ9UBL3 628 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 CDH22Q9UJ99 828 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 SLC8A2Q9UPR5 921 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 PLEKHM1Q9Y4G2 1056 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 ENTPD2Q9Y5L3 495 aa6.91□□□□□ -1.3
SMCO1-201ENST00000397537 GOLGA6L10A0A0M3HER8 536 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 MYO1CO00159 1063 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 RASGRF2O14827 1237 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 SCAF4O95104 1147 aaKnown RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 RASAL1O95294 804 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 C1SP09871 688 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 ACP5P13686 325 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 COX7A2P14406 83 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 MSNP26038 577 aaKnown RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 IL13P35225 146 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 ARL1P40616 181 aaPredicted RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 RWDD2BP57060 319 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 GAMTQ14353 236 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 KARSQ15046 597 aaKnown RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 DPYSL2Q16555 572 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 ASTE1Q2TB18 679 aaPredicted RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 MCMDC2Q4G0Z9 681 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 NOTUMQ6P988 496 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 RBM43Q6ZSC3 357 aaKnown RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 CENPQQ7L2Z9 268 aaPredicted RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 EFCAB13Q8IY85 973 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 IP6K1Q92551 441 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 SGCDQ92629 289 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 MASTLQ96GX5 879 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 SEMA3CQ99985 751 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 GLT8D2Q9H1C3 349 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 XPNPEP3Q9NQH7 507 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 ALKBH4Q9NXW9 302 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 TBC1D7Q9P0N9 293 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 MYOTQ9UBF9 498 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 TEKT2Q9UIF3 430 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 BAG5Q9UL15 447 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 STRAPQ9Y3F4 350 aaKnown RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 COL14A1Q05707 1796 aaKnown RBP6.9□□□□□ -1.3
SMCO1-201ENST00000397537 KIF15Q9NS87 1388 aa6.9□□□□□ -1.3
SMCO1-201ENST00000397537 KIAA1210Q9ULL0 1709 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 SALL3Q9BXA9 1300 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 QSOX1O00391 747 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 SMAD6O43541 496 aaKnown RBP6.9□□□□□ -1.31
SMCO1-201ENST00000397537 LMNAP02545 664 aaKnown RBP6.9□□□□□ -1.31
SMCO1-201ENST00000397537 FGF4P08620 206 aa6.9□□□□□ -1.31
SMCO1-201ENST00000397537 SRFP11831 508 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms