RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ABL2P42684 1182 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 MAGEA6P43360 314 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 LPIN1Q14693 890 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 RNF220Q5VTB9 566 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 PIM3Q86V86 326 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 LGI2Q8N0V4 545 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 GABPB2Q8TAK5 448 aaPredicted RBP10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 GDPD5Q8WTR4 605 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 TBATAQ96M53 351 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 SORT1Q99523 831 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 ZNF184Q99676 751 aaPredicted RBP10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 FAM124BQ9H5Z6 455 aaPredicted RBP10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 TRPC7Q9HCX4 862 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 NCKIPSDQ9NZQ3 722 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 V9GYQ6 96 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 A0A0U1RQS6 177 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 HAS3O00219 553 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 HDAC3O15379 428 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 ALDH1A2O94788 518 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 YWHAQP27348 245 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 SERPINH1P50454 418 aaKnown RBP10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 CSE1LP55060 971 aaKnown RBP10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 USP46P62068 366 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 DSG1Q02413 1049 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 BIRC2Q13490 618 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 GPR158Q5T848 1215 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 LIPMQ5VYY2 423 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 STEAP4Q687X5 459 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 ANO7Q6IWH7 933 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 GK5Q6ZS86 529 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 TAS2R42Q7RTR8 314 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 DEFB128Q7Z7B8 93 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 TMEM135Q86UB9 458 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 SERPINB11Q96P15 392 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 FAM96AQ9H5X1 160 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 PIF1Q9H611 641 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 BPIFA1Q9NP55 256 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 SLC45A1Q9Y2W3 748 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 PCDHB12Q9Y5F1 795 aa10.55□□□□□ -0.72
CPSF1P1-201ENST00000397477 GIPC1O14908 333 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 JUNP05412 331 aaKnown RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 CDK7P50613 346 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 RENBPP51606 427 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 FKBP1BP68106 108 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 GRIK3Q13003 919 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 TLDC1Q6P9B6 456 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 TIFABQ6ZNK6 161 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 MAVSQ7Z434 540 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 NUP93Q8N1F7 819 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 ESAMQ96AP7 390 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 SERPINI1Q99574 410 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 RTP3Q9BQQ7 232 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 UBE2OQ9C0C9 1292 aaKnown RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 SENP6Q9GZR1 1112 aaPredicted RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 SEMA6AQ9H2E6 1030 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 COPS7BQ9H9Q2 264 aaPredicted RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 BATF3Q9NR55 127 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 CDH22Q9UJ99 828 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 A0A0U1RQF3 1178 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 MATN3O15232 486 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 PSMD3O43242 534 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 DLX3O60479 287 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 GNAZP19086 355 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 FGFR3P22607 806 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 ACVRL1P37023 503 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 TWF1Q12792 350 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 PRKAA1Q13131 559 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 ATG14Q6ZNE5 492 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 RASAL3Q86YV0 1011 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 KYQ8NBH2 561 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 ICA1LQ8NDH6 482 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 RGS18Q9NS28 235 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 STX18Q9P2W9 335 aaKnown RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 PCDHB5Q9Y5E4 795 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 THRAP10827 490 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 DNAJB2P25686 324 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 STX1BP61266 288 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 ADAM17P78536 824 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 TIGD7Q6NT04 549 aaPredicted RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 NET1Q7Z628 596 aaPredicted RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 RNF180Q86T96 592 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 TSC22D3Q99576 134 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 MRPL46Q9H2W6 279 aaKnown RBP10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 ENTPD7Q9NQZ7 604 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 FAM8A1Q9UBU6 413 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 GIMAP2Q9UG22 337 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 LCTP09848 1927 aa10.54□□□□□ -0.72
CPSF1P1-201ENST00000397477 GOLGA4Q13439 2230 aaKnown RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ARHGEF37A1IGU5 675 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 SUPT3HB4E1H0 165 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 SUPT3HO75486 399 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ATP6V1B1P15313 513 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 ITGB6P18564 788 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 PEX2P28328 305 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 KCNQ1P51787 676 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 KPNA2P52292 529 aaKnown RBP10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 NAB1Q13506 487 aa10.53□□□□□ -0.72
CPSF1P1-201ENST00000397477 PFKFB4Q16877 469 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms