RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 A0A0A0MRY4 1105 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 CCDC151A5D8V7 595 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 MATN3O15232 486 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 MAFKO60675 156 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 OPHN1O60890 802 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 SEC31AO94979 1220 aaKnown RBP13.46□□□□□ -0.25
SEC13-209ENST00000397117 HNRNPLP14866 589 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEC13-209ENST00000397117 PLTPP55058 493 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 ANKRD20A2Q5SQ80 823 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 ANKRD20A1Q5TYW2 823 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 ANKRD20A3Q5VUR7 823 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 IZUMO3Q5VZ72 239 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 ANO7Q6IWH7 933 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 FBXO38Q6PIJ6 1188 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 ZNF783Q6ZMS7 281 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 CYP2U1Q7Z449 544 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 PCGF5Q86SE9 256 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 EIF1ADQ8N9N8 165 aaKnown RBP13.46□□□□□ -0.25
SEC13-209ENST00000397117 ARHGEF2Q92974 986 aaKnown RBP13.46□□□□□ -0.25
SEC13-209ENST00000397117 SPATA13Q96N96 652 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 VAT1Q99536 393 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 SPON2Q9BUD6 331 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 FAM129AQ9BZQ8 928 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 KLHL8Q9P2G9 620 aaPredicted RBP13.46□□□□□ -0.25
SEC13-209ENST00000397117 EVLQ9UI08 416 aaPredicted RBP13.46□□□□□ -0.25
SEC13-209ENST00000397117 ANAPC5Q9UJX4 755 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 TRHDEQ9UKU6 1024 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 TPX2Q9ULW0 747 aaKnown RBP13.46□□□□□ -0.25
SEC13-209ENST00000397117 HPCAL4Q9UM19 191 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 FASNP49327 2511 aaKnown RBP13.46□□□□□ -0.25
SEC13-209ENST00000397117 DOCK4Q8N1I0 1966 aa13.46□□□□□ -0.25
SEC13-209ENST00000397117 A0A0D9SEW6 157 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 DNALI1O14645 258 aaPredicted RBP13.46□□□□□ -0.26
SEC13-209ENST00000397117 NFATC1O95644 943 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 CCNB1P14635 433 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 PTPN3P26045 913 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 IVDP26440 423 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 HOXD9P28356 352 aaPredicted RBP13.46□□□□□ -0.26
SEC13-209ENST00000397117 ACVRL1P37023 503 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 SEC13P55735 322 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 OXCT1P55809 520 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 BASP1P80723 227 aaKnown RBP13.46□□□□□ -0.26
SEC13-209ENST00000397117 MRPS21P82921 87 aaKnown RBP13.46□□□□□ -0.26
SEC13-209ENST00000397117 CAV1Q03135 178 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 WASHC5Q12768 1159 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 SERINC3Q13530 473 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 CRY1Q16526 586 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 RNF219Q5W0B1 726 aaPredicted RBP13.46□□□□□ -0.26
SEC13-209ENST00000397117 TMEM92Q6UXU6 159 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 TAB3Q8N5C8 712 aaPredicted RBP13.46□□□□□ -0.26
SEC13-209ENST00000397117 MDGA1Q8NFP4 955 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.46□□□□□ -0.26
SEC13-209ENST00000397117 SCNM1Q9BWG6 230 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 BBS2Q9BXC9 721 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 CEP41Q9BYV8 373 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 SPHK2Q9NRA0 654 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 PLK2Q9NYY3 685 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 GRHL1Q9NZI5 618 aa13.46□□□□□ -0.26
SEC13-209ENST00000397117 MTRF1LQ9UGC7 380 aaKnown RBP13.46□□□□□ -0.26
SEC13-209ENST00000397117 ADAMTS9Q9P2N4 1935 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.45□□□□□ -0.26
SEC13-209ENST00000397117 NEDD8-MDP1E9PL57 170 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 JCHAINP01591 159 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 HOXB3P14651 431 aaPredicted RBP13.45□□□□□ -0.26
SEC13-209ENST00000397117 P2RY2P41231 377 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 DHPSP49366 369 aaPredicted RBP13.45□□□□□ -0.26
SEC13-209ENST00000397117 RENBPP51606 427 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 ITGA8P53708 1063 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 IL10RBQ08334 325 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 COL9A2Q14055 689 aaPredicted RBP13.45□□□□□ -0.26
SEC13-209ENST00000397117 TEX44Q53QW1 395 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 ITPRIPL1Q6GPH6 555 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 CXorf57Q6NSI4 855 aaKnown RBP13.45□□□□□ -0.26
SEC13-209ENST00000397117 PID1Q7Z2X4 250 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 TMEM25Q86YD3 366 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 GSPT2Q8IYD1 628 aaKnown RBP13.45□□□□□ -0.26
SEC13-209ENST00000397117 ADGRG2Q8IZP9 1017 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 ZNF567Q8N184 647 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 ZNF557Q8N988 423 aaPredicted RBP13.45□□□□□ -0.26
SEC13-209ENST00000397117 OR7D4Q8NG98 312 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 PIGKQ92643 395 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 ART4Q93070 314 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 FATE1Q969F0 183 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 AGAP3Q96P47 875 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 ATP13A1Q9HD20 1204 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 RAB6BQ9NRW1 208 aa13.45□□□□□ -0.26
SEC13-209ENST00000397117 E7EVH7 732 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 J3KR12 359 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 ADH1CP00326 375 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 CYP17A1P05093 508 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 MYBL2P10244 700 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 FDFT1P37268 417 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 SLC6A11P48066 632 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 IFI35P80217 286 aaPredicted RBP13.44□□□□□ -0.26
SEC13-209ENST00000397117 MESP2Q0VG99 397 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 ZBTB17Q13105 803 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 MORF4L2Q15014 288 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 UAP1L1Q3KQV9 507 aa13.44□□□□□ -0.26
SEC13-209ENST00000397117 FSCBQ5H9T9 825 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms