RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ZNF592Q92610 1267 aa13.96□□□□□ -0.17
SEC13-205ENST00000397101 TTC9Q92623 222 aa13.96□□□□□ -0.17
SEC13-205ENST00000397101 DDIT4Q9NX09 232 aa13.96□□□□□ -0.17
SEC13-205ENST00000397101 PCSK1NQ9UHG2 260 aa13.96□□□□□ -0.17
SEC13-205ENST00000397101 ERVW-1Q9UQF0 538 aa13.96□□□□□ -0.17
SEC13-205ENST00000397101 CYSRT1A8MQ03 144 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 PRPSAP2O60256 369 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 RNGTTO60942 597 aaKnown RBP13.95□□□□□ -0.18
SEC13-205ENST00000397101 F9P00740 461 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 FYNP06241 537 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 GP1BAP07359 652 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 CASQ1P31415 396 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 SLC6A4P31645 630 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 MAN1A1P33908 653 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 LSSP48449 732 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 KCNC4Q03721 635 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 TAC4Q86UU9 113 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 SERPINB11Q96P15 392 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 NPY6RQ99463 290 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 ZWILCHQ9H900 591 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 DNAI1Q9UI46 699 aa13.95□□□□□ -0.18
SEC13-205ENST00000397101 KIF2AO00139 706 aaPredicted RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 MSI1O43347 362 aaKnown RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 SIGLEC6O43699 453 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 TFE3P19532 575 aaPredicted RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 MZF1P28698 734 aaPredicted RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 VASPP50552 380 aaPredicted RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 TBX4P57082 545 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 PPP2CBP62714 309 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 PPP2CAP67775 309 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 PITX1P78337 314 aaPredicted RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 ECT2LQ008S8 904 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 NNTQ13423 1086 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 RPS6KA1Q15418 735 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 PITRM1Q5JRX3 1037 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 RFWD3Q6PCD5 774 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 SYT10Q6XYQ8 523 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 KDM7AQ6ZMT4 941 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 STRADAQ7RTN6 431 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 TRIM69Q86WT6 500 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 CCDC117Q8IWD4 279 aaPredicted RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 RHOT1Q8IXI2 618 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 UBL4BQ8N7F7 174 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 NIPA2Q8N8Q9 360 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 FAM181AQ8N9Y4 354 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 OR4C6Q8NH72 309 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 KCNE4Q8WWG9 221 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 GRAMD1AQ96CP6 724 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 PRICKLE1Q96MT3 831 aaPredicted RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 DEPDC7Q96QD5 511 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 SEMA4CQ9C0C4 833 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 WDCPQ9H6R7 721 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 USP29Q9HBJ7 922 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 PACSIN2Q9UNF0 486 aaPredicted RBP13.94□□□□□ -0.18
SEC13-205ENST00000397101 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
SEC13-205ENST00000397101 PCDHB1Q9Y5F3 818 aa13.94□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3DA0A087WVF3 549 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3IA0A087WXS9 549 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3EA0A087X179 549 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3KA0A087X1G2 549 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3FA6NER0 549 aaPredicted RBP13.93□□□□□ -0.18
SEC13-205ENST00000397101 TTC34A8MYJ7 566 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3LB9A6J9 549 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 PRAMEF26H0Y7S4 382 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TRIM38O00635 465 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 RIOK3O14730 519 aaKnown RBP13.93□□□□□ -0.18
SEC13-205ENST00000397101 PLRG1O43660 514 aaKnown RBP13.93□□□□□ -0.18
SEC13-205ENST00000397101 WISP1O95388 367 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TUBB4AP04350 444 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3HP0C7X1 549 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 CKMT1AP12532 417 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 MIPP30301 263 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 DRD3P35462 400 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 PSMD8P48556 350 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 ETF1P62495 437 aaKnown RBP13.93□□□□□ -0.18
SEC13-205ENST00000397101 GABREP78334 506 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 SKOR1P84550 965 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 VAC14Q08AM6 782 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 SLC12A1Q13621 1099 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 CDH18Q13634 790 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 STAT4Q14765 748 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 ARL13BQ3SXY8 428 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 ARHGAP40Q5TG30 622 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3GQ6DHY5 549 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 NADSYN1Q6IA69 706 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3CQ6IPX1 549 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 NT5DC3Q86UY8 548 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 FAM131BQ86XD5 332 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 CPNE8Q86YQ8 564 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 TBC1D3Q8IZP1 549 aaPredicted RBP13.93□□□□□ -0.18
SEC13-205ENST00000397101 SLC25A45Q8N413 288 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 LRRC57Q8N9N7 239 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 HSPH1Q92598 858 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 MED8Q96G25 268 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 NAPGQ99747 312 aaPredicted RBP13.93□□□□□ -0.18
SEC13-205ENST00000397101 POLR1BQ9H9Y6 1135 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 CPNE5Q9HCH3 593 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 ASCL3Q9NQ33 180 aa13.93□□□□□ -0.18
SEC13-205ENST00000397101 THSD1Q9NS62 852 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms