RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 WDCPQ9H6R7 721 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 UBAP1Q9NZ09 502 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 EGFL7Q9UHF1 273 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 FZD10Q9ULW2 581 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CDY1Q9Y6F8 540 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 SAC3D1A6NKF1 404 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 GPC4O75487 556 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 CLPTM1O96005 669 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 GSTA2P09210 222 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 UQCRBP14927 111 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 ZFXP17010 805 aaPredicted RBP9.4□□□□□ -0.9
NDE1-201ENST00000396354 CKMT2P17540 419 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 WARSP23381 471 aaKnown RBP9.4□□□□□ -0.9
NDE1-201ENST00000396354 YWHAQP27348 245 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 MAGEA3P43357 314 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 CPT1AP50416 773 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 CDK7P50613 346 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 NIPAL4Q0D2K0 466 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 CEACAM7Q14002 265 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 SLC5A9Q2M3M2 681 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 AGKQ53H12 422 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 FSCBQ5H9T9 825 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 SCN4BQ8IWT1 228 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 HBEGFQ99075 208 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 PKP2Q99959 881 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 DCUN1D5Q9BTE7 237 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 MLPHQ9BV36 600 aaPredicted RBP9.4□□□□□ -0.9
NDE1-201ENST00000396354 DUSP16Q9BY84 665 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 MRPL1Q9BYD6 325 aaKnown RBP9.4□□□□□ -0.9
NDE1-201ENST00000396354 NDFIP2Q9NV92 336 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 TMLHEQ9NVH6 421 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 PDP2Q9P2J9 529 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 STAP1Q9ULZ2 295 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 LZTS1Q9Y250 596 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 ASB3Q9Y575 518 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 AP4B1Q9Y6B7 739 aa9.4□□□□□ -0.9
NDE1-201ENST00000396354 BIRC5O15392 142 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 LRIG2O94898 1065 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 OR4Q2P0C623 313 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 TPSB2P20231 275 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 DPP6P42658 865 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 ARPP19P56211 112 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 PTK2BQ14289 1009 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 TPSAB1Q15661 275 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 SLC25A52Q3SY17 297 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 MTX3Q5HYI7 312 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 RBM20Q5T481 1227 aaKnown RBP9.4□□□□□ -0.91
NDE1-201ENST00000396354 ACAD11Q709F0 780 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 NUP93Q8N1F7 819 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 NAT16Q8N8M0 369 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 B4GALNT2Q8NHY0 566 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 LRRC39Q96DD0 335 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 PCED1BQ96HM7 432 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 SENP8Q96LD8 212 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 CYP2S1Q96SQ9 504 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 HNRNPABQ99729 332 aaKnown RBP9.4□□□□□ -0.91
NDE1-201ENST00000396354 POMKQ9H5K3 350 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 PNPLA8Q9NP80 782 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 GTF2IRD1Q9UHL9 959 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 CROCCQ5TZA2 2017 aa9.4□□□□□ -0.91
NDE1-201ENST00000396354 ARL5CA6NH57 179 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 F8W8V4 182 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 G3V2L1 256 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 TNPO2O14787 897 aaKnown RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 FKBP6O75344 327 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 GJB3O75712 270 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CD4P01730 458 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 AHSGP02765 367 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 NPR3P17342 541 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 GRK2P25098 689 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 LRPAP1P30533 357 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CD68P34810 354 aaPredicted RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 FDFT1P37268 417 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 MRPS6P82932 125 aaKnown RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 KIF19Q2TAC6 998 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 PLA2G4EQ3MJ16 856 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 GNASQ5JWF2 1037 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 PQLC1Q8N2U9 271 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 OR52K2Q8NGK3 314 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 NT5C3BQ969T7 300 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 ESAMQ96AP7 390 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 HIC2Q96JB3 615 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 EPAS1Q99814 870 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 SENP6Q9GZR1 1112 aaPredicted RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 WDR6Q9NNW5 1121 aaKnown RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 FAM105AQ9NUU6 356 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CDYLQ9Y232 598 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 SF3B1O75533 1304 aaKnown RBP eCLIP9.39□□□□□ -0.914e-9■■■■■ 126.2
NDE1-201ENST00000396354 NLRC5Q86WI3 1866 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 A0A0U1RQS6 177 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 LRRC14BA6NHZ5 514 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 HHLA1C9JL84 531 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 SUPT7LO94864 414 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 FAM200BP0CF97 657 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 CHRM3P20309 590 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 KCNA5P22460 613 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 ADRA1BP35368 520 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 NR2C2P49116 596 aa9.39□□□□□ -0.91
NDE1-201ENST00000396354 RPL14P50914 215 aaKnown RBP9.39□□□□□ -0.91
NDE1-201ENST00000396354 CDKL1Q00532 357 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms