RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ACADVLP49748 655 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 NEK3P51956 506 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 FANCCQ00597 558 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 CYP4F3Q08477 520 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 C19orf57Q0VDD7 668 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 SMAD1Q15797 465 aaKnown RBP8.99□□□□□ -0.97
ATG4A-205ENST00000394892 ASIC2Q16515 512 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 KLHL40Q2TBA0 621 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 SETMARQ53H47 684 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-205ENST00000394892 CCDC157Q569K6 752 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 ZNF542PQ5EBM4 170 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 EFHC2Q5JST6 749 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 NEK5Q6P3R8 708 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 DHRS13Q6UX07 377 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 OR2AP1Q8NGE2 309 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 SKA1Q96BD8 255 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 CELF6Q96J87 481 aaKnown RBP8.99□□□□□ -0.97
ATG4A-205ENST00000394892 KLHL32Q96NJ5 620 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 SLC39A8Q9C0K1 460 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 NAT10Q9H0A0 1025 aaKnown RBP8.99□□□□□ -0.97
ATG4A-205ENST00000394892 ISCUQ9H1K1 167 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 RETREG1Q9H6L5 497 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 ETNK2Q9NVF9 386 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 PCSK1NQ9UHG2 260 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 TPX2Q9ULW0 747 aaKnown RBP8.99□□□□□ -0.97
ATG4A-205ENST00000394892 U3KQA8 63 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 FASNP49327 2511 aaKnown RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 A0A087WV48 116 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 KRIT1O00522 736 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 ENC1O14682 589 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 CASC3O15234 703 aaKnown RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 BUB1O43683 1085 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 PIGNO95427 931 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 POP4O95707 220 aaKnown RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 PEX11BO96011 259 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 ITGAVP06756 1048 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 CDK4P11802 303 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 PSMA2P25787 234 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 HNF1BP35680 557 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 NUDT1P36639 197 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 ABCG1P45844 678 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 YBEYP58557 167 aaPredicted RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 KLHL30Q0D2K2 578 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 OVGP1Q12889 678 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 DPYSQ14117 519 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 FZD2Q14332 565 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 STAT4Q14765 748 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 PROX2Q3B8N5 592 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 ZNF805Q5CZA5 627 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 FIGNQ5HY92 759 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 KCTD16Q68DU8 428 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 DCUN1D2Q6PH85 259 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 LRRC69Q6ZNQ3 347 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 ARHGEF26Q96DR7 871 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 KLHDC7BQ96G42 594 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 BTBD6Q96KE9 485 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 EXOC2Q96KP1 924 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 CNDP2Q96KP4 475 aaKnown RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 CCDC114Q96M63 670 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 SLC17A9Q9BYT1 436 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 EDEM3Q9BZQ6 932 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 DHX35Q9H5Z1 703 aaKnown RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 MBNL1Q9NR56 388 aaKnown RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 PARVAQ9NVD7 372 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 KLHL11Q9NVR0 708 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 CWC15Q9P013 229 aaKnown RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 CNOT8Q9UFF9 292 aaKnown RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 AP4E1Q9UPM8 1137 aa8.98□□□□□ -0.97
ATG4A-205ENST00000394892 FARP1Q9Y4F1 1045 aaPredicted RBP8.98□□□□□ -0.97
ATG4A-205ENST00000394892 A0A087X0T9 212 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 TSPAN11A1L157 253 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 RRP8O43159 456 aaKnown RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 SIGLEC6O43699 453 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 PRAMEF11O60813 436 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 MMP20O60882 483 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 LDOC1O95751 146 aaPredicted RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 GYPCP04921 128 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 PRKCGP05129 697 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 FAM228BP0C875 321 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 GM2AP17900 193 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 ERCC2P18074 760 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 HNRNPA2B1P22626 353 aaKnown RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 DGKAP23743 735 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 AKT2P31751 481 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 IGFALSP35858 605 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 ETFBP38117 255 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 RECQLP46063 649 aaPredicted RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 PAPOLAP51003 745 aaKnown RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 PFN3P60673 137 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 SEMG2Q02383 582 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 EIF2B5Q13144 721 aaKnown RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 PARP15Q460N3 678 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 INO80DQ53TQ3 878 aaPredicted RBP8.97□□□□□ -0.97
ATG4A-205ENST00000394892 ERMARDQ5T6L9 678 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 FBXL19Q6PCT2 694 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 GDPD4Q6W3E5 623 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 Q6ZSR6 202 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 RFX8Q6ZV50 586 aa8.97□□□□□ -0.97
ATG4A-205ENST00000394892 TMPRSS12Q86WS5 348 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms