RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CPA6Q8N4T0 437 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 PPTC7Q8NI37 304 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 FANCEQ9HB96 536 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 PCDH12Q9NPG4 1184 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 CACNB4O00305 520 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 FFAR3O14843 346 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 GPR42O15529 346 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TLR5O60602 858 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ATP9AO75110 1047 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 CYP1A2P05177 515 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 SLC35G4P0C7Q5 338 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 LRPAP1P30533 357 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 MAXP61244 160 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ITGA7Q13683 1181 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ZNF697Q5TEC3 545 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 CERS5Q8N5B7 392 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 PTGR2Q8N8N7 351 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 SLC25A23Q9BV35 468 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 REEP1Q9H902 201 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 MRPL39Q9NYK5 338 aaKnown RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 AGO1Q9UL18 857 aaKnown RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 SLC27A6Q9Y2P4 619 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 CCL16O15467 120 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 SLC25A12O75746 678 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 NTRK1P04629 796 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 GOT1P17174 413 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 GRM5P41594 1212 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 PTSQ03393 145 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 PEX6Q13608 980 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 C15orf52Q6ZUT6 534 aaKnown RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 APLFQ8IW19 511 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ATXN2LQ8WWM7 1075 aaKnown RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TTPALQ9BTX7 342 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ANKZF1Q9H8Y5 726 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 MORF4L1Q9UBU8 362 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ASTN1O14525 1302 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3DA0A087WVF3 549 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3IA0A087WXS9 549 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3EA0A087X179 549 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3KA0A087X1G2 549 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 C15orf38-AP3S2A0A0A6YYH1 394 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3FA6NER0 549 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 OR6C75A6NL08 312 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3LB9A6J9 549 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3HP0C7X1 549 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 OR1D2P34982 312 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 SNAP47Q5SQN1 464 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 GPR158Q5T848 1215 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3GQ6DHY5 549 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3CQ6IPX1 549 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 UNC5AQ6ZN44 842 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ARPINQ7Z6K5 226 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 PARGQ86W56 976 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TBC1D3Q8IZP1 549 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 C12orf29Q8N999 325 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 C6orf62Q9GZU0 229 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ABCG4Q9H172 646 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 ACP6Q9NPH0 428 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 KIAA1522Q9P206 1035 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-203ENST00000394872 TPRKBQ9Y3C4 175 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 PTCH2Q9Y6C5 1203 aa10.48□□□□□ -0.73
COL4A6-203ENST00000394872 OPLAHO14841 1288 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 PDE5AO76074 875 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 MMP3P08254 477 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 ELFN1P0C7U0 828 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 ME2P23368 584 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 GSTM5P46439 218 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 BRCC3P46736 316 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 ZNF57Q68EA5 555 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 GPR156Q8NFN8 814 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 RMND5BQ96G75 393 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 MARK4Q96L34 752 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 MCCC1Q96RQ3 725 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 CDRT15Q96T59 188 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 MRPL45Q9BRJ2 306 aaKnown RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 BCL2L14Q9BZR8 327 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 DDX20Q9UHI6 824 aaKnown RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 MAPRE3Q9UPY8 281 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 AP3M1Q9Y2T2 418 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 PIRTP0C851 137 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 SAMD4BQ5PRF9 694 aaKnown RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 INTS11Q5TA45 600 aaKnown RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 TOP6BLQ8N6T0 577 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 IL31RAQ8NI17 732 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 NMD3Q96D46 503 aaKnown RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 CERS2Q96G23 380 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 RNF157Q96PX1 679 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 ARMCX1Q9P291 453 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 ADAM28Q9UKQ2 775 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 L1RE1Q9UN81 338 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 WTIPA6NIX2 430 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 CLOCKO15516 846 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 GCATO75600 419 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 MLYCDO95822 493 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 APODP05090 189 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 IFI35P80217 286 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 MRPS5P82675 430 aaKnown RBP10.47□□□□□ -0.73
COL4A6-203ENST00000394872 CRTC3Q6UUV7 619 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 LRRC74BQ6ZQY2 392 aa10.47□□□□□ -0.73
COL4A6-203ENST00000394872 ZNF276Q8N554 614 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms