RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SHOC2Q9UQ13 582 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SSC5DA1L4H1 1573 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 A0A1W2PPM1 405 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 A0A1W2PQ45 241 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 A0A1W2PQY0 241 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 NT5C1B-RDH14C9J2C7 533 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 E9PBE3 544 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 H3BNX3 289 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 J3QRK9 145 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PSMD11O00231 422 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PPEF2O14830 753 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZBTB24O43167 697 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 EFCAB14O75071 495 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 LRCH4O75427 683 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 JCHAINP01591 159 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 POLBP06746 335 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CFHP08603 1231 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 MBL2P11226 248 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 CDK4P11802 303 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CKBP12277 381 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 GM2AP17900 193 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TYMPP19971 482 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CCNA2P20248 432 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CRABP2P29373 138 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SSTR1P30872 391 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CASP2P42575 452 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 VEGFBP49765 207 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 RAD23AP54725 363 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 RAD51Q06609 339 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TRIM60Q495X7 471 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PDPK2PQ6A1A2 396 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 KCNT2Q6UVM3 1135 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SLC26A9Q7LBE3 791 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 COLGALT1Q8NBJ5 622 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ST13P5Q8NFI4 369 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 OR6P1Q8NGX9 317 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 HTR3CQ8WXA8 447 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 FBXL8Q96CD0 374 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 RMDN1Q96DB5 314 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CDRT15Q96T59 188 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZNF670Q9BS34 389 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 MUC3BQ9H195 1237 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CLK4Q9HAZ1 481 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 ENTPD7Q9NQZ7 604 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PNPLA3Q9NST1 481 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SAE1Q9UBE0 346 aaPredicted RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 STK39Q9UEW8 545 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 HMGXB4Q9UGU5 601 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 RAB26Q9ULW5 256 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PSMD13Q9UNM6 376 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TMEM98Q9Y2Y6 226 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 AAR2Q9Y312 384 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 SQORQ9Y6N5 450 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CDK5RAP2Q96SN8 1893 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 MYBPHLA2RUH7 354 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SAC3D1A6NKF1 404 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SDR42E2A6NKP2 422 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PDZK1P1A8MUH7 402 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PIRO00625 290 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 RAD51BO15315 384 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CLOCKO15516 846 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 DCXO43602 365 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A9O60656 530 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CAPN15O75808 1086 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ITGAVP06756 1048 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 IQCF3P0C7M6 154 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A6P19224 532 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A1P22309 533 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A4P22310 534 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TYK2P29597 1187 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A3P35503 534 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A5P35504 534 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 GSSP48637 474 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CLK1P49759 484 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 SERPINB9P50453 376 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 GEMP55040 296 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UBAP2LQ14157 1087 aaKnown RBP5.75□□□□□ -1.49
RFFL-202ENST00000394597 DPYSL3Q14195 570 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 INPP5AQ14642 412 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TIGD5Q53EQ6 642 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ARHGAP15Q53QZ3 475 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SFT2D3Q587I9 215 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 MARCH8Q5T0T0 291 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 GALNT18Q6P9A2 607 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 PRUNE1Q86TP1 453 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 CDH24Q86UP0 819 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TTC30AQ86WT1 665 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 NPAS4Q8IUM7 802 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 MICU2Q8IYU8 434 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 FBXO36Q8NEA4 188 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ZFP28Q8NHY6 868 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 TTPALQ9BTX7 342 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 SDCBP2Q9H190 292 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A7Q9HAW7 530 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A10Q9HAW8 530 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 UGT1A8Q9HAW9 530 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 VPS45Q9NRW7 570 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 OR12D3Q9UGF7 316 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 ADAM28Q9UKQ2 775 aa5.75□□□□□ -1.49
RFFL-202ENST00000394597 FNDC3AQ9Y2H6 1198 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms