RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ALKAL1Q6UXT8 129 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 CLEC20AQ6ZU45 233 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 TMEM26Q6ZUK4 368 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 PAQR9Q6ZVX9 377 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 FAM47BQ8NA70 645 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 LRTOMTQ8WZ04 291 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 EMID1Q96A84 441 aaPredicted RBP10.09□□□□□ -0.79
PSEN1-204ENST00000394164 CAB39LQ9H9S4 337 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 SSX2IPQ9Y2D8 614 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 SNX13Q9Y5W8 968 aa10.09□□□□□ -0.79
PSEN1-204ENST00000394164 GPC6Q9Y625 555 aaPredicted RBP10.09□□□□□ -0.79
PSEN1-204ENST00000394164 C1orf232A0A0U1RR37 186 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 TPP1O14773 563 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 KDM1AO60341 852 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 CLIC3O95833 236 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 F2P00734 622 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 C1QAP02745 245 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 NR4A1P22736 598 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 PPARGP37231 505 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 SCNN1GP51170 649 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 CSE1LP55060 971 aaKnown RBP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 KLF10Q13118 480 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 CARTPTQ16568 116 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 MGAT5BQ3V5L5 792 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 MTX3Q5HYI7 312 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 PERM1Q5SV97 790 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 CHST15Q7LFX5 561 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 SETD3Q86TU7 594 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 UNC93AQ86WB7 457 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 TNS4Q8IZW8 715 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 ZNF567Q8N184 647 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 C3orf58Q8NDZ4 430 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 UPF1Q92900 1129 aaKnown RBP eCLIP10.08□□□□□ -0.82e-6■■■■■ 32.6
PSEN1-204ENST00000394164 WNT8BQ93098 351 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 RCN3Q96D15 328 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 TNIP3Q96KP6 325 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 SENP8Q96LD8 212 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 ZNF560Q96MR9 790 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 OR52B2Q96RD2 323 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 SLC29A1Q99808 456 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 AP5M1Q9H0R1 490 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 SIAEQ9HAT2 523 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 CRTAC1Q9NQ79 661 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 FETUBQ9UGM5 382 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 FZD10Q9ULW2 581 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 PLXNB2O15031 1838 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 KRT38O76015 456 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 IL1BP01584 269 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 CD4P01730 458 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 NPR3P17342 541 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 PTPN9P43378 593 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 SNX16P57768 344 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 TRAF2Q12933 501 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 CEACAM7Q14002 265 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 DLG2Q15700 870 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 ADRM1Q16186 407 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 SLC25A52Q3SY17 297 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 GNASQ5JWF2 1037 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 OTUD1Q5VV17 481 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 RWDD4Q6NW29 188 aaKnown RBP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 CYP2R1Q6VVX0 501 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 GPR180Q86V85 440 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 NT5DC4Q86YG4 428 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 DSELQ8IZU8 1212 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 PNPLA1Q8N8W4 532 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 HPS1Q92902 700 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 PPWD1Q96BP3 646 aaKnown RBP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 QKIQ96PU8 341 aaKnown RBP eCLIP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 AGAP2Q99490 1192 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 PARK7Q99497 189 aaKnown RBP10.08□□□□□ -0.8
PSEN1-204ENST00000394164 DUSP16Q9BY84 665 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 PCDHAC1Q9H158 963 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 ZFYVE28Q9HCC9 887 aa10.08□□□□□ -0.8
PSEN1-204ENST00000394164 C17orf102A2RUQ5 167 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 GNAO1P09471 354 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 FGF3P11487 239 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-204ENST00000394164 CKMT2P17540 419 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 ERCC2P18074 760 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 RPL26P61254 145 aaKnown RBP10.07□□□□□ -0.8
PSEN1-204ENST00000394164 ESRRGP62508 458 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 TAF1CQ15572 869 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-204ENST00000394164 SV2CQ496J9 727 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 AARS2Q5JTZ9 985 aaKnown RBP10.07□□□□□ -0.8
PSEN1-204ENST00000394164 LGSNQ5TDP6 509 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 MBLAC2Q68D91 279 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 ARHGAP17Q68EM7 881 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 NXNQ6DKJ4 435 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 BNC2Q6ZN30 1099 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-204ENST00000394164 CHERPQ8IWX8 916 aaKnown RBP10.07□□□□□ -0.8
PSEN1-204ENST00000394164 CRYBG2Q8N1P7 616 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 TTC39CQ8N584 583 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 ADCY4Q8NFM4 1077 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 MAPK15Q8TD08 544 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 BORCS5Q969J3 196 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 CLIP3Q96DZ5 547 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 PCED1BQ96HM7 432 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 BIRC8Q96P09 236 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 COG4Q9H9E3 785 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 PRDM16Q9HAZ2 1276 aa10.07□□□□□ -0.8
PSEN1-204ENST00000394164 C20orf96Q9NUD7 363 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms